KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100404006
Entry
100404006         CDS       T03264                                 
Symbol
SRP72
Name
(RefSeq) signal recognition particle subunit SRP72 isoform X1
  KO
K03108  signal recognition particle subunit SRP72
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03060  Protein export
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    100404006 (SRP72)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cjc02044]
    100404006 (SRP72)
Secretion system [BR:cjc02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   100404006 (SRP72)
SSDB
Motif
Pfam: TPR_19 SRP72 TPR_14 ANAPC3 TPR_2 SRP_TPR_like TPR_8 TPR_1 TPR_12 TPR_6 ARM_TT21 TPR_9 BTAD ARM_TT21_5th SNAP ARM_TT21_N HrpB1_HrpK TPR_Slam TPR_7 TPR_10 TPR_11 TPR_MalT NatA_aux_su DUF627 HAT_PRP39_C CCDC-167 SgrR_N CRISPR_Cse2 DNA_pol3_delta_C
Other DBs
NCBI-GeneID: 100404006
NCBI-ProteinID: XP_002745860
Ensembl: ENSCJAG00000017998
UniProt: U3CLM3 U3C7D3
LinkDB
Position
3:complement(136406784..136442187)
AA seq 671 aa
MASGGSGGVSVPALWSEVNRYGQNGDFTRALKTVNKILQSSKDDVTALHCKVVCLIQNGS
FKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENALKTIENSTQQTDKLKELYGQVLY
RLERYDECLVVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGFQEGTHELCY
NTACALIGQGQLNQAMKILQKAEDLCRRSLSEDADGTEEDPQAELAIIHGQMAYILQLQG
RTEEALQLYNQIIKLKPTDVGLLAVIANNIITINKDQNVFDSKKKVKLTNAEGVEFKLSK
KQLQAIEFNKALLAMYTNQAEQCRRISASLQSQSPEHLLPVLIQAAQLCREKQHTKAIEL
LQEFSDQHPENAAEIKLTMAQLKISQGNISKACLILRSIQELNHKPGMVSALVTMYSHEE
DIDSAIEVFTQAIQWYQSHQPKSAAHLSLIREAANFKLKYGRKKEAISDLEQLWKQNPKD
IHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSPGATYIRKKGGKVTGD
SQPKEQGQGDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGK
GTQGATTGASSELDASKTVSSPPTSPRPGSAATVSASTSNIIPPRHQKPAGAPATKKKQQ
QKKKKGGKGGW
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggcgagcggcggcagcgggggggtttcagtgcctgcgctgtggagtgaagtgaaccgg
tatggccagaacggcgacttcacgcgcgctctcaagaccgtcaataagatactacagagc
agcaaagatgatgtaactgccctgcattgtaaagtggtatgccttatccagaatggaagt
ttcaaggaagccttgaatgtcatcaatactcacaccaaagtgttagccaataactctctc
tcctttgaaaaggcatattgcgagtacaggctaaacagaattgagaatgccttgaagacg
atagaaaattccacccagcagacagacaaactgaaggagctttatggacaagtgttatac
cgtttggaacgctatgatgaatgcttagtggtatatagagatcttgtccgaaactcccaa
gatgattatgatgaggagaggaaaacaaacctttcagcagttgttgcagctcagagcaat
tgggaaaaagtggttccggagaacttgggcttccaggaaggcacacacgagctgtgctac
aacactgcatgtgcactgataggccaaggccagctgaaccaagccatgaaaatcctgcaa
aaagctgaagatctttgccgccgttcattatcagaagatgctgatgggactgaggaggac
ccacaggcagaactggccatcattcatggtcagatggcctatattctgcagcttcagggt
cgaacagaggaggctttgcaactttacaatcaaataataaaactaaaaccaacagatgtg
ggattactagctgtaattgcaaataacatcattaccattaacaaggaccaaaatgtcttt
gactctaagaagaaagtgaaattaaccaatgcggaaggagtagagtttaagctttccaag
aaacagctacaagctatagagtttaacaaagctttacttgctatgtatacaaaccaggca
gaacaatgccgcagaatatctgccagtttacagtcccaaagccctgagcatctcttacct
gtgttaatccaagctgcccagctctgccgtgaaaagcagcacacaaaagcaattgagctg
cttcaggaattttcagatcagcatccagaaaatgcagctgaaattaagctgaccatggca
cagttgaaaatttctcaaggtaatatttctaaagcatgtctaatattgagaagcatacag
gagttaaatcataaaccaggcatggtgtctgcattagtgaccatgtatagtcatgaagaa
gatattgatagtgccattgaggtcttcacacaagctatccagtggtatcaaagccatcag
cccaaatctgctgctcatttgtccttgataagagaagctgcaaacttcaaactcaaatat
gggcggaagaaggaggcaattagtgacctagaacagctatggaaacaaaatccaaaagat
attcacacccttgcacagcttatttctgcttactcgcttgtagatccagagaaagccaaa
gctcttagtaaacacttgccatcgtcagatagtatgtctctcaaagtagatgttgaggct
cttgaaaattctcctggtgctacatatattcggaaaaagggtggaaaagttactggagat
agtcaaccaaaggaacaaggacagggagatttgaaaaagaagaaaaagaaaaagaaggga
aaattgcctaagaattacgacccaaaagttaccccagatccagaaagatggctgccaatg
cgagaacgttcttactaccggggaagaaagaagggtaaaaagaaggatcagattggaaaa
gggacccagggagcaactacaggagcttcatctgaactggatgccagtaaaactgtgagc
agcccacccacctccccaagacctggcagtgcagcaacagtatctgcctctacaagtaac
atcatacccccaagacaccagaaacctgcaggggctccagcaacaaaaaagaaacagcaa
cagaaaaagaagaaaggtggaaaaggtggctggtga

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