Callithrix jacchus (white-tufted-ear marmoset): 100404149
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Entry
100404149 CDS
T03264
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100404149 (SOX3)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100404149 (SOX3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100404149
NCBI-ProteinID:
XP_008988227
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All DBs
Position
X:complement(132752741..132754881)
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AA seq
370 aa
AA seq
DB search
MYSLLETELKNPVGTPAQAPGTGGSAAPGGAGKSSANAAGGANAGGGSSGGASGGGGGTD
QDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRL
RAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPSGLLPPGAAAAAAAAAAAAAASSPVGVGQ
RLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPPMHRYDMAGLQYSPMMPPG
AQSYMNVAAAAAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKS
EPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHGVHQHYQGAGTA
VNGTVPLTHI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctactggagactgaactcaagaaccccgtagggacacccgcacaagcgccg
ggcaccggcggctccgcagccccgggaggcgcaggcaagagcagtgcgaacgcagccggc
ggcgcgaacgcaggcggcgggagcagcggtggtgcgagcggcggtggcgggggcacagac
caggaccgagtgaagcggcccatgaatgccttcatggtatggtcccgcgggcagcggcgc
aaaatggccctggagaaccccaagatgcacaactctgagatcagcaagcgcttgggcgcc
gactggaaactgctgaccgacgccgagaagcgaccattcatcgacgaggccaagcgactt
cgcgccgtgcacatgaaggagtatccggactacaagtaccggccgcgccgcaagaccaag
acgctgctcaagaaagataagtactccctgcccagcggcctgctgccccccggcgccgcc
gccgccgccgccgcagcggcggctgccgctgctgctagcagtccagtgggcgtgggccag
cgcctggacacgtacacgcacgtgaacggctgggccaacggcgcgtactcgctggtgcag
gagcagctgggctacgcgcagcccccgagcatgagcagcccgccgccgccgcccgcgctg
cccccgatgcaccgctacgacatggctggcctgcagtacagccccatgatgccgcctggc
gcccagagctacatgaacgtcgctgcggcggccgccgccgcctcgggctacgggggcatg
gcgccctcagccaccgccgccgcggccgccgcctacgggcagcagcccgccaccgccgcg
gccgcagccgcggccgcagccgccatgagtctgggccccatgggctcggtagtgaagtcc
gagcccagctcaccgccgcccgccatcgcatcacactctcagcgcgcgtgcctgggcgac
ctgcgcgacatgatcagcatgtacctgccacccggcggggacgcggccgacgccgcctct
ccgctgcccggcggtcgcctgcacggcgtgcaccagcactaccagggcgccgggactgca
gtcaacggaacggtgccgctgacccacatctga
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