Callithrix jacchus (white-tufted-ear marmoset): 100404248
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Entry
100404248 CDS
T03264
Symbol
RBBP5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X2
KO
K14961
COMPASS component SWD1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100404248 (RBBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100404248 (RBBP5)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
100404248 (RBBP5)
COMPASS/SET1 complex (yeast)
100404248 (RBBP5)
MLL-HCF complex
100404248 (RBBP5)
MLL3/MLL4 complex
100404248 (RBBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_LRRK2
WDR54
Beta-prop_WDR75_1st
Beta-prop_WDR11_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
BUD22
Motif
Other DBs
NCBI-GeneID:
100404248
NCBI-ProteinID:
XP_002760751
Ensembl:
ENSCJAG00000017172
UniProt:
U3DAP2
LinkDB
All DBs
Position
19:complement(28522386..28570304)
Genome browser
AA seq
538 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQ
NKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKT
DSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSK
KKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLTAGGAISELL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgagttgctggagtcctttgggcagaactatccagaggaagctgatggaact
ttggattgtatcagcatggctctgacttgcacctttaacaggtggggcacactgcttgcg
gttggctgtaatgatggccgaattgtcatctgggatttcttgacaagaggcattgctaaa
ataattagtgcacacatccatccagtgtgttctttatgctggagtcgagatggtcataaa
ctcgtgagtgcttccactgataacatagtgtcacagtgggatgttctttcaggcgactgc
gaccagagatttcgattcccttcacccatcttaaaagtccaatatcatccacgagatcag
aacaaggttctcgtgtgtcccatgaaatctgctcctgtcatgttgaccctttcagattcc
aaacatgttgttctgccggtggacgatgactccgatttgaacgtggtggcatcttttgat
aggcgaggggaatatatttatacaggaaacgcaaaaggcaagattttggttctaaaaaca
gactctcaggatcttgttgcttccttcagagtaacaactggaacaagcaataccacagcc
attaagtcaattgagtttgcccggaaggggagttgctttttaattaacacagcagatcga
ataatcagagtttatgatggcagagaaatcttaacatgtggaagagatggagagcctgaa
cctatgcagaaattgcaggatttggtgaataggaccccatggaagaaatgttgtttctct
ggggatggagaatacatagtggcaggttctgcccggcagcatgccctgtacatctgggag
aagagcattggcaacctggtgaagattcttcatgggacaagaggagaactcctcttggat
gtcgcttggcatcctgttcgacccataatagcatctatttctagtggagtggtatctatc
tgggcacagaatcaagtagaaaactggagtgcatttgctccagacttcaaagaattggat
gaaaatgtagaatatgaagaaagagaatcagaatttgatattgaagatgaagataagagt
gagcctgagcagacaggggctgatgctgcagaagatgaagaagtggatgtcaccagcgtg
gaccctatcgctgccttctgtagcagtgatgaagagctggaagattcaaaggctctattg
tatttacccattgctcctgaggtagaagacccagaagaaaatccttatggccccccaccg
gatgcagtccaaacctccttgatggatgaaggggctagttcagagaagaagaggcagtcc
tcagctgatgggtcccagccacctaagaagaaacccaaaacaaccaatatagaacttcaa
ggagtaccaaatgatgaagtccatccattactgggtgtgaagggggatggcaaatccaag
aagaagcaagcaggccggcctaaaggatcaaaaggtaaagagaaagattctccatttaaa
ccgaaactctacaaaggggacagaggtttacctctggaaggatcagcgaagggtaaagtg
caggcggaactcagccagcccttgacagcaggaggagcaatctcagaactgttatga
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