Callithrix jacchus (white-tufted-ear marmoset): 100404299
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Entry
100404299 CDS
T03264
Symbol
IFT56
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100404299 (IFT56)
Cilium and associated proteins [BR:
cjc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100404299 (IFT56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_14
TPR_2
TPR_16
TPR_8
TPR_12
TPR_17
TPR_1
TPR_9
TPR_6
Coatomer_E
TPR_11
PyocinActivator
Motif
Other DBs
NCBI-GeneID:
100404299
NCBI-ProteinID:
XP_035110522
Ensembl:
ENSCJAG00000013133
LinkDB
All DBs
Position
8:complement(105396525..105477477)
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AA seq
631 aa
AA seq
DB search
MAENDALLPRGTTALPRRKLHGTKKPRVLVLQRGFFSRRTSLPAGLPWKQSVLCGCGETL
WRGLCCLSAEGTHNTDVKMMLSRAKPAVGGDVQHTDKRKKKGRKIPKLEELLSQRDFTGA
ITLLEFKRHVGEQEEDTNLWIGYCAFHLGDYKRALEEYENATKEENCNSEVWVNLACTYF
FLGMYKQAEEAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHY
MRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIAL
NLKACNHFRLYSGKAAEAELKSLMDNASSFEFAKELIRHNLVVFRGGEGALRVLPPLVDV
IPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQ
QFFHLVGGSASECDTIPGRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAK
AATGNTSEAEEVFRLIQSEKIKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSL
LQLIANDCYKMGQFYYSAKAFDVLERLDPNPKYWKGKKGACVGIFQMILAGREPKETLRE
VVHLLRSTGNTQVEYIIRIMKKWAKENRVPI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgacgctctcctcccgagaggaaccactgctcttccacggcggaagctg
catggaaccaagaagccgcgggtgctggttctccaacgaggctttttctcccgacggacc
agcctcccggcggggttgccgtggaaacagagcgtgctttgtggatgcggcgaaacgctg
tggcgcggcctttgctgtctgtctgcggagggaactcacaacaccgacgtcaagatgatg
ctttcaagggccaaacctgctgtaggcggggacgtccagcacactgacaaaagaaagaag
aaaggtaggaagattccaaaactagaggagcttctttcacaaagagatttcactggagct
attaccctattggagttcaaacgtcatgttggggaacaagaagaggatactaatttgtgg
attggatattgtgcctttcacctgggtgactacaagagagctctggaggaatatgaaaat
gctacaaaagaggaaaattgtaattctgaagtctgggtgaacctagcttgcacttacttc
tttcttgggatgtataaacaagccgaagaagctggatttaaagcttcgaaaagccgactc
caaaaccgcctcctcttccacttggctcacaagtttaatgatgagaaaaagttgatgagc
tttcatcagaatcttcaggacgtcacagaagatcaactcagtttggcctcaatccactat
atgcgatctcactaccaagaagctattgatatatataagcgaatactgctagataacagg
gaataccttgccctcaatgtttatgtggccctctgctactataaattggattactatgat
gtgtctcaagaagttttggctgtttaccttcagcaaattcctgatagtaccatcgcactc
aatcttaaagcctgtaatcattttcgcctttacagcggcaaagcagctgaggcagaactc
aaaagcttgatggacaatgcttcatccttcgaatttgctaaagaactcatcaggcacaat
ctggttgttttccgaggaggtgaaggggctttgcgggttttacctcccctggttgatgtc
attcctgaagctaggctcaacttggtgatttactaccttcgtcaagatgatgtacaagaa
gcttataacttgattaaggatctagaacctactactcctcaggagtatattctcaaagga
gtggtcaatgcagcccttggccaggaaatgggttcaagggatcatatgaaaattgcccag
cagttcttccatttggtgggaggatcagctagcgaatgtgatacaataccagggaggcag
tgcatggcttcctgtttcttcctgcttaagcaatttgatgatgtcttgatttacctcaat
tcatttaagagttacttctataatgatgacatctttaactttaattatgcacaagccaaa
gctgcaacaggcaataccagtgaggctgaagaggtgttccgcttgatccaaagtgagaag
ataaaaaatgattacatttacctcagctggttagctcggtgctatattatgaataagaaa
ccaagactagcctgggaactttatctcaagatggaaacctctggcgagtccttcagtctc
ttacagctcattgctaacgactgctacaagatgggtcagttttactattctgccaaagct
tttgacgtcctcgagaggctggatcccaaccccaaatattggaaaggcaaaaagggtgcc
tgtgtgggcattttccagatgatcttagctgggagagaacccaaagagacccttcgagaa
gtggtccatttactgagaagcacaggtaacacccaagtagagtacatcatccggatcatg
aagaaatgggccaaagaaaacagagtacccatctaa
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