Callithrix jacchus (white-tufted-ear marmoset): 100404334
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Entry
100404334 CDS
T03264
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100404334 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100404334 (TRIM54)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100404334 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
Sina_RING
CoiA_N
COG2_C
DUF349
DD_DDX21-DDX50
MIF4G_like_2
FlgN
DUF5799
DUF1421
UvrD_C
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100404334
NCBI-ProteinID:
XP_035129433
UniProt:
F6YC50
LinkDB
All DBs
Position
14:complement(85590095..85612311)
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AA seq
360 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQKFESLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEPFTVSVEHVAEMLRTIDFQPGTSGEEEDEEVALDGDEGTAGPEEGRPDGP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggataacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccaacacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaatcct
ctgtggcagtcccggggttccaccaccgtgtcttcaggaggccgtttccgctgcccatcc
tgcaggcatgaggttgtcctggacagacacggagtctacggcctgcagcgaaacctgcta
gtggagaacattatcgacatttacaagcaggagtcatccaggccgctacactccaaggct
gagcagcacctcatgtgtgaggaacatgaagaggagaagattaatatctactgcctgagc
tgtgaggtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaagcgccagaagagtgagctcagcgatggcattgcgatg
ctggtggcaggcaatgaccgggtgcaagcagtgatcacacagatggaggaagtgtgccag
accatcgaggacaatagccggaggcagaagcagttgttaaaccagaagttcgagagcctg
tgtgcagtgttggaggagcgcaagggcgagctgctgcaggcactggcccgggagcaagag
gagaagctgcagcgtgttcgtggcctcatccgtcagtacggagatcacctggaggcctcc
tctaagctggtggagtctgccatacagtccatggaagagccacagatggcgctctacctc
cagcaggccaaggagctgatcaataaggtcggggctatgtcgaaggtggaactggcaggg
cggccagagccaggctatgagagcatggagccattcaccgtgagcgtagagcacgtggcc
gaaatgctgcggaccatcgacttccagccgggcacttccggagaggaagaagatgaggaa
gtggccctggacggagacgagggcactgcggggccggaggaagggcggccggatgggcct
taa
DBGET
integrated database retrieval system
