KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100404338
Entry
100404338         CDS       T03264                                 
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013  Nucleocytoplasmic transport
cjc03015  mRNA surveillance pathway
cjc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100404338 (NCBP2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100404338 (NCBP2)
   03015 mRNA surveillance pathway
    100404338 (NCBP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100404338 (NCBP2)
   03041 Spliceosome [BR:cjc03041]
    100404338 (NCBP2)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     100404338 (NCBP2)
Spliceosome [BR:cjc03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    100404338 (NCBP2)
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 100404338
NCBI-ProteinID: XP_002758268
Ensembl: ENSCJAG00000013735
UniProt: F7B893
LinkDB
Position
15:18961779..18969468
AA seq 197 aa
MTILSPGLGPIRCASPPVSASATAVAASCRELSHPRPLLCAMSGGLLKALRSDSYVELSQ
YRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKT
ACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYR
QDYDAGRGGYGKLAQNQ
NT seq 594 nt   +upstreamnt  +downstreamnt
atgacgatactgtcgcccggattgggtccaataagatgcgcgtctccgcccgtctccgct
tccgccacggcagtcgccgcctcgtgtcgggagttgtcgcatcctcgtccgcttctctgc
gctatgtcgggtggcctcctgaaggcgctgcgcagcgactcctacgtggagctgagccag
taccgggaccagcacttccggggtgacaatgaagaacaagaaaaattactcaagaaaagc
tgtacgttatatgttggaaatctttctttttacacaactgaagaacaaatctatgaactc
ttcagcaaaagtggtgacataaagaaaatcattatgggtctggataaaatgaagaaaaca
gcatgtggattctgttttgtggaatattactcacgagcagatgcagaaaatgccatgcgg
tacataaatggaactcgtctagatgaccgaatcattcgcacagactgggatgcaggcttt
aaggagggcaggcagtatggccgcgggcgatctgggggccaggtacgggatgagtatcgg
caggactatgatgctgggagaggcggctatggaaaactggcacagaaccagtga

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