KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100404384
Entry
100404384         CDS       T03264                                 
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4
  KO
K05617  solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04721  Synaptic vesicle cycle
cjc04724  Glutamatergic synapse
cjc05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    100404384 (SLC1A6)
   04721 Synaptic vesicle cycle
    100404384 (SLC1A6)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    100404384 (SLC1A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cjc02000]
    100404384 (SLC1A6)
Transporters [BR:cjc02000]
 Solute carrier family (SLC)
  SLC1: High-affinity glutamate and neutral amino acid transporter
   100404384 (SLC1A6)
SSDB
Motif
Pfam: SDF
Other DBs
NCBI-GeneID: 100404384
NCBI-ProteinID: XP_035140371
Ensembl: ENSCJAG00000004498
LinkDB
Position
22:complement(13194371..13222444)
AA seq 564 aa
MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMD
LIRNMFPPNLVEACFKQFKTQYSTRVVTRTIVRTENGSELGASMPPPFSVENGTSLLENV
TRALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPL
IYFLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgagcagccatggcaacagcctgttcctgcgggagagcggccagcggctgggtcgggtg
ggttggctgcagcggctgcaggaaagcctgcagcagagagcactgcgcacgcgcctgcgc
ctgcagaccatgacccgtgagcacgtgctgcgcttcctgcgccgaaacgccttcatcctg
ctgacggtcagcgccgtggtcatcggggtcagcctcgcctttgccctgcgcccctatcag
ctcacctaccgccagatcaagtatttctcttttcctggagagcttctcatgaggatgctg
cagatgctggtgttgcctctcattgtctccagcctggtcacaggtatggcgtccctggac
aacaaggccacggggcggatggggatgcgggcagctgtgtactacatggtgaccaccatc
atcgcggtcttcattggaatcctcatggtcaccatcatccatccagggaagggctccaag
gaggggctgcaccgggagggccggatcgagaccatccccacagccgatgccttcatggac
ctgatcagaaatatgtttccaccaaaccttgtggaggcctgcttcaaacagttcaagacg
cagtacagcacaagggtggtaaccaggaccatcgtgaggacagagaacgggtctgagctg
ggtgcctccatgcctcctccgttctcagtggagaatggaaccagcctcctggaaaatgtc
actcgggccttgggcaccctgcaggaggtgctgagctttgaggagaccgtacctgtgcct
ggctctgccaacggcatcaatgccctgggcctcgtggtcttctctgtggcctttgggctg
gttatcggtggcatgaaacacaagggccgagtcctcagggacttcttcgacagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacccgtgggcatcctgttc
ctgatcgctgggaagattctggagatggaagacatggctgtcctggggggtcagctgggc
atgtacaccctgaccgtcatcgtgggcctgttcctccatgctggtggcgtccttcccctc
atctacttcctcgtcactcaccggaaccccttccccttcattgggggcatgctacaagcc
ctcattactgccatgggcacgtcttccagctccgcaacgctgcccatcaccttccgctgc
ctggaggagggcctgggtgtggaccgccgcatcaccaggttcgtcctgcccgtgggtgcc
acggtcaacatggacggcactgccctctacgaggccctggctgccatcttcattgctcaa
gttaacaactacgagctaaacctgggtcagatcacaaccatcagcatcacggccacagca
gccagtgttggggctgctggcatcccccaggcgggtctggtcaccatggttattgtgctc
acgtcggtcggcttgcccacggaagacatcacgctcatcatcgccgtggactggtttctt
gaccggcttcgcacaatgaccaatgtactgggagactcaattggagcggccgtcatcgag
cacttgtctcagcgggagctggagctgcaagaagctgagctcaccctccccagcctgggg
aaaccctacaagtccctcatggcacaggagaagggggcatctcggggacggggaggcaat
gagagtgctatgtga

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