Callithrix jacchus (white-tufted-ear marmoset): 100404384
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Entry
100404384 CDS
T03264
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04721
Synaptic vesicle cycle
cjc04724
Glutamatergic synapse
cjc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100404384 (SLC1A6)
04721 Synaptic vesicle cycle
100404384 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100404384 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100404384 (SLC1A6)
Transporters [BR:
cjc02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100404384 (SLC1A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
100404384
NCBI-ProteinID:
XP_035140371
Ensembl:
ENSCJAG00000004498
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All DBs
Position
22:complement(13194371..13222444)
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AA seq
564 aa
AA seq
DB search
MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMD
LIRNMFPPNLVEACFKQFKTQYSTRVVTRTIVRTENGSELGASMPPPFSVENGTSLLENV
TRALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPL
IYFLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccatggcaacagcctgttcctgcgggagagcggccagcggctgggtcgggtg
ggttggctgcagcggctgcaggaaagcctgcagcagagagcactgcgcacgcgcctgcgc
ctgcagaccatgacccgtgagcacgtgctgcgcttcctgcgccgaaacgccttcatcctg
ctgacggtcagcgccgtggtcatcggggtcagcctcgcctttgccctgcgcccctatcag
ctcacctaccgccagatcaagtatttctcttttcctggagagcttctcatgaggatgctg
cagatgctggtgttgcctctcattgtctccagcctggtcacaggtatggcgtccctggac
aacaaggccacggggcggatggggatgcgggcagctgtgtactacatggtgaccaccatc
atcgcggtcttcattggaatcctcatggtcaccatcatccatccagggaagggctccaag
gaggggctgcaccgggagggccggatcgagaccatccccacagccgatgccttcatggac
ctgatcagaaatatgtttccaccaaaccttgtggaggcctgcttcaaacagttcaagacg
cagtacagcacaagggtggtaaccaggaccatcgtgaggacagagaacgggtctgagctg
ggtgcctccatgcctcctccgttctcagtggagaatggaaccagcctcctggaaaatgtc
actcgggccttgggcaccctgcaggaggtgctgagctttgaggagaccgtacctgtgcct
ggctctgccaacggcatcaatgccctgggcctcgtggtcttctctgtggcctttgggctg
gttatcggtggcatgaaacacaagggccgagtcctcagggacttcttcgacagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacccgtgggcatcctgttc
ctgatcgctgggaagattctggagatggaagacatggctgtcctggggggtcagctgggc
atgtacaccctgaccgtcatcgtgggcctgttcctccatgctggtggcgtccttcccctc
atctacttcctcgtcactcaccggaaccccttccccttcattgggggcatgctacaagcc
ctcattactgccatgggcacgtcttccagctccgcaacgctgcccatcaccttccgctgc
ctggaggagggcctgggtgtggaccgccgcatcaccaggttcgtcctgcccgtgggtgcc
acggtcaacatggacggcactgccctctacgaggccctggctgccatcttcattgctcaa
gttaacaactacgagctaaacctgggtcagatcacaaccatcagcatcacggccacagca
gccagtgttggggctgctggcatcccccaggcgggtctggtcaccatggttattgtgctc
acgtcggtcggcttgcccacggaagacatcacgctcatcatcgccgtggactggtttctt
gaccggcttcgcacaatgaccaatgtactgggagactcaattggagcggccgtcatcgag
cacttgtctcagcgggagctggagctgcaagaagctgagctcaccctccccagcctgggg
aaaccctacaagtccctcatggcacaggagaagggggcatctcggggacggggaggcaat
gagagtgctatgtga
DBGET
integrated database retrieval system