KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100404714
Entry
100404714         CDS       T03264                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X3
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjc04121]
    100404714 (HLTF)
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100404714 (HLTF)
Enzymes [BR:cjc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100404714 (HLTF)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100404714 (HLTF)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100404714 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_2 zf-RING_5 RING_XB3-XBAT31 ResIII zf-ANAPC11 zf-C3HC4_4 zf-Nse HDA2-3 zf-rbx1 Prok-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 100404714
NCBI-ProteinID: XP_002759553
Ensembl: ENSCJAG00000001426
UniProt: U3D164
LinkDB
Position
17:29205181..29259518
AA seq 1009 aa
MSWTFKRDPVWKYLQTVQYKVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEELDSVLF
GSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKDLAGALA
YIMDNNLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTFGF
TLESAWGSGRAGPSYSMPLHAAVQMTTEQLKTEFDRLFEDLKEDDKTHEMEPAEAIETPL
LPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGRPLPIERIKKNLLKKECNVNDDSMKLGGNNTSEKADGLIKEASRC
SEQPSISDVKEKNKYRMSELSSSRPKRRKTAVQYIESCDSEEIEASELPQKMKGKLKNVQ
SETKGRVKAGSSKVIEDVAFACALTSSVPTTKKKMLKTGACAVEGSKKTDVEERPRTTLI
ICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILTHDYGT
KGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLL
SFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPE
RKVFIQHITLSDDERRIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTY
LLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFC
KPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELACDSEKKSSMEWTSSSKINALMH
ALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNT
EAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKF
IVKDSVEENMLKIQNKKRELAAGAFGTKKPNADEMKQAKINEIRTLIDL
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtcctggacgttcaagagggatcctgtttggaagtacttgcagactgtccaatataaa
gttcatggaaattttccacgcctctcatatccaactttctttccacgttttgaattccaa
gatgttatccctccagatgactttctaactagtgatgaagaactagattcagttttattt
ggaagtttgagaggtcacgtggttggactacgttattacacaggagtagttaataataat
gaaatggttgcattacaacgagatccgaataatccttatgataagaatgcgattaaagta
aacaatgtgaatggaaatcaggttggccatttaaagaaagatcttgcaggtgctttggcc
tatattatggacaacaatttggcacaagttgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctctgcatatgactttttggggaaaagaagaaaatagaaaagcagtt
tcagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttcggattc
actttggaaagtgcttggggctctggaagggctggaccaagctatagtatgccattgcat
gctgcagtacagatgacaactgaacagcttaaaacagaatttgacagattgtttgaagat
ttaaaagaagatgataaaacccatgaaatggaaccggctgaggctattgaaacaccacta
cttccacatcaaaaacaagctctagcatggatggtgtcacgtgaaaacagcaaagaactt
ccaccattctgggaacaacgaaatgacttatactataacacaataacaaatttttctgag
aaggaccgaccagaaaatgtccatggaggaattttagctgatgatatgggtttgggtaaa
actcttacagctattgcagtaatccttaccaacttccatgatggcagacctcttcctatt
gaaagaattaaaaagaatctactgaagaaggaatgtaatgttaacgatgattctatgaaa
cttggaggaaacaataccagtgaaaaggcagatggactaatcaaagaagcatctagatgt
agtgaacaacccagtatttcagatgtcaaggagaagaataagtatcgaatgtcagaattg
tctagttcccgccccaaaagaagaaaaactgctgtccagtacatagaaagctgtgattca
gaggaaattgaagcaagtgaattgccacagaaaatgaaaggcaaactgaaaaatgtacag
tcagaaactaaaggcagggtgaaagcagggtcttctaaggttatagaagatgtggcattt
gcatgtgcattaacctcatctgttcctacaacaaaaaagaaaatgttgaaaacgggagct
tgtgcagtggaggggtcaaagaaaactgatgttgaggagagaccaagaacaacactgatc
atctgtccactttctgtgttaagcaactggattgaccagtttggacaacatataaaatca
gatgtacacttgaatttttatgtttattatggtcctgatcgtattagagaaccagcctta
ctttcaaaacaggatattgttttgactacgtataatattttaactcatgactatggaact
aaaggggatagtccattacatagcataaggtggctaagagtgatcctggatgaaggacat
gccatacgaaatccaaatgctcagcagacaaaagctgtacttgacttagaatcagaaaga
agatgggttttgacaggtactccaatccagaattctttaaaggacttatggtctcttctt
tcctttttaaaacttaaaccatttattgatagagaatggtggcatagaacaatacagcgt
cctgtcacaatgggagatgaaggaggacttaggcgtttacagtccctaattaaaaatatt
acacttagaagaacaaagacaagcaaaattaaaggaaaacctgttttggagttaccagaa
cgtaaagtatttattcagcacattacactttcagatgacgaaagaaggatttatcagtct
gtgaaaaatgaaggcagagctactattggaagatattttaatgaagggactgtcctggca
cattatgcagatgtcctgggtcttttgcttagattgcggcaaatttgttgtcatacttac
cttcttacaaacgcagtgtcttccagtggcccctcaggaaatgatacacctgaagaactg
cgaaagaagttaataaggaagatgaagttaattctgagctcaggttcagatgaagaatgt
gcaatttgcctggattctttaacagttcctgtgataacacattgtgcacatgtattttgt
aaaccctgtatttgccaagtcattcagaatgagcagccacatgctaaatgccctttatgc
agaaatgatatacatgaagataatttattagaatgtcctccagaagaattagcatgtgac
agtgagaaaaagtctagtatggaatggacatccagttcaaagattaatgcgctaatgcat
gcattgactgatttaagaaagaagaatcccaacattaaaagtttggttgtttctcagttt
acaacattcctgtctttaatagaaataccacttaaagcctctggatttgtgtttacccgt
ttggatggttccatggcccaaaagaaaagagttgagtcaattcagtgttttcaaaacact
gaagcaggatctccaactataatgcttctgtctttaaaagcaggtggagttggtttgaat
ctgtctgcagcttctcgagtgtttttaatggatccagcctggaatcctgctgctgaagat
cagtgctttgacagatgccatagacttggccagaagcaagaagttatcatcacaaaattc
attgtaaaggactctgttgaagaaaatatgctgaaaatacaaaacaaaaagagagaactt
gcagcaggagcctttggaactaaaaaaccaaatgctgacgaaatgaaacaagctaaaatt
aacgaaatcagaacattaattgatttataa

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