Callithrix jacchus (white-tufted-ear marmoset): 100405410
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Entry
100405410 CDS
T03264
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X3
KO
K08533
RAR-related orphan receptor beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100405410 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100405410 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cjc03310
]
100405410 (RORB)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100405410 (RORB)
Nuclear receptors [BR:
cjc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100405410 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100405410
NCBI-ProteinID:
XP_002742890
Ensembl:
ENSCJAG00000001216
UniProt:
F7IE87
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All DBs
Position
1:complement(86961014..87159464)
Genome browser
AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSISNGLSNLNNETSGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYNSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPEIVNTLFPPLYKELFNPDCATSCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaatcgaagtgataccatgcaaaatttgtggcgataagtcctctgggatc
cactacggagtcatcacatgtgaaggctgcaagggattctttaggaggagccagcagaac
aatgcctcttattcctgcccaaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcaagagatgctgtg
aagtttgggaggatgtccaagaagcaaagggacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggaacagcggcagcagcagagtggggaggcggaagcccttgccagg
gtgtacagcagcagcatcagcaatggcctgagcaacctgaacaatgagaccagcggcact
tatgccaacgggcacgtcattgacctgcccaagtctgagggttattacaacgttgattcc
ggtcagccatcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctataactctttcaacaat
gggcagttagcaccagggataaccatgaccgaaatcgatcgaattgcacagaacatcatt
aagtcccatttggagacatgtcaatataccatggaagagctgcaccagctggcgtggcag
acccacacctatgaagaaattaaagcttatcaaagcaagtccagggaagcactgtggcaa
caatgtgccatccagatcactcacgccatccaatacgtggtggagtttgcaaaacggata
acaggcttcatggagctctgtcaaaatgatcaaattctacttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggagggatgcaaatgttcaaagccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggagatcgct
ttgttctcatctgctgttctgatatctccagaccgagcctggcttatagaaccacggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaagctgcaggtatttaagcaatctcatccagagatagtgaataca
ctgtttcctccgttatacaaggagctttttaatcctgactgtgccaccagctgcaaatga
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