Callithrix jacchus (white-tufted-ear marmoset): 100405421
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Entry
100405421 CDS
T03264
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100405421 (TAF1B)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100405421 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
CoV_NSP2_N
Motif
Other DBs
NCBI-GeneID:
100405421
NCBI-ProteinID:
XP_002758086
Ensembl:
ENSCJAG00000006420
UniProt:
F7D4T5
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All DBs
Position
14:complement(103009504..103089208)
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AA seq
635 aa
AA seq
DB search
MRGFAAAQAHGILSPGLAFPAGGLLPPLPEAALATRVTGPGGGNCRGAAMDLEEAEEFKE
RCTQCEAVSWGLTDEGKYYCTSCHNVTERSKEVINSDIIPNAQIKALNRGLKRKNNSEKG
WDWYVCEGFQHILYQQAEALKNLGVGPELKNDVLHNFWKRYLQKSKQAYCKNPVYTTGRK
PTVLEDNLSHSDWASEPELPSDVNSPFLESGMESQSDVHTRKSLRISKALQSETSVCSGS
LDGVEYSQRKEKGLVKMTVPQTLAFCYLSLLWQREAITLSDLLRFVEEDHIPYINAFQHF
PEQMKLYGRDRGIFGTESWPNYDDIYKKTIEVATFLDLPRFPDITEDCYLHPNILCMKYL
MEVNLPDEMHSLTCHVVKMTGMGEADFLTFDPIAKVAKTVKYDVQAVAVIVVVLKLLFLL
DDNLEWSLSNLAEKHNEKNKKDKPWFNFRKWYQIMKKAFDEKKQNWEEARAKYLWKSEKP
LYYSYVDKPVAYKKREMVVNLQKQFSTLVDSTPTAGKKSPSSFQFNWTEEDTERTCFHGH
SLQGVLKEKGQSLLTKNSLYWLSTQKFCRCYCTHVTTYEESNYSLSYQFILNLFSFLLRI
KASLLHEEVSLVEKELFKKKYSVTKKKSKSKKRRR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtttcgctgccgcgcaggcgcacggaatcctaagtccggggcttgcgtttccg
gccggagggcttctcccgcctctcccggaagctgctctcgctactcgggtaacgggtccc
ggcggtggcaactgccgcggcgccgcgatggacctcgaggaggcggaagagtttaaagaa
cgttgtactcagtgtgaggctgtctcatggggtcttactgatgaaggcaaatattactgc
acttcctgccacaatgttacagagagatctaaggaagttataaacagtgatattattcct
aatgcccagataaaagccctcaaccgggggcttaaaaggaaaaataactctgaaaaaggc
tgggattggtatgtgtgtgaaggtttccagcacattctttatcaacaagcagaagcctta
aagaaccttggagtaggcccagagttaaagaatgacgttttacataatttttggaagcgc
taccttcagaagagcaagcaggcatattgtaagaacccagtttataccactggaaggaaa
cctacggtattagaagataatctcagtcattcagactgggctagtgagcctgagctgcca
agtgatgtcaactctccttttcttgaaagtggaatggaatctcagtctgatgtccacact
cgaaaatctctccgcatcagcaaagcattgcagtcagaaacatctgtctgctctggatcc
ctggatggagttgaatactcacaacgaaaggagaagggacttgtgaagatgaccgtgcca
cagacacttgccttctgttatctgtccttactttggcagagagaagcaataacgctttca
gatcttttgagatttgttgaagaggaccatattccttacataaatgcttttcagcatttt
ccagaacagatgaaattatatgggcgtgacagaggaatctttggtacagagtcttggcct
aactacgatgatatctataaaaaaacaattgaagttgccacatttttagatttgcctcgt
tttccagacataactgaagactgctatcttcatcccaacatattgtgtatgaaatacttg
atggaagtcaacctccccgatgaaatgcatagcttaacttgccacgtggtaaaaatgact
ggaatgggagaagcagattttttgacatttgatcctatagctaaagtggcaaaaactgtt
aagtatgatgtacaagctgtagctgtcattgtggtggtcctgaaactgctctttctactg
gatgacaatttagagtggtctttgtctaatcttgctgaaaaacataatgaaaagaacaaa
aaagataagccatggtttaatttcagaaagtggtaccaaattatgaagaaagcttttgat
gagaaaaaacaaaactgggaagaagcaagggccaagtacctgtggaaaagtgaaaagcca
ctctactactcatatgtcgacaaaccagtagcgtataaaaaaagagaaatggtggtgaat
ttacagaaacaatttagcacactagttgattcaacaccaactgctggaaaaaaaagccct
tcaagttttcagttcaactggactgaagaagacactgagagaacttgtttccatggacac
agcctccagggagtcctgaaagagaaaggccagtcactgctaaccaagaattcattatac
tggctcagtacacagaagttctgcagatgctattgtacacacgtgacaacctacgaggaa
tcaaactattctctgagttatcagtttatactaaatctcttctccttcctgctcagaata
aaggcttcccttctccatgaagaagtgagtttagttgaaaaggaactttttaagaaaaaa
tacagtgtaacaaaaaagaaatcaaaatccaagaaacggagacgatag
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