Callithrix jacchus (white-tufted-ear marmoset): 100405465
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Entry
100405465 CDS
T03264
Symbol
SNTA1
Name
(RefSeq) alpha-1-syntrophin isoform X1
KO
K24063
alpha-syntrophin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04820
Cytoskeleton in muscle cells
cjc05410
Hypertrophic cardiomyopathy
cjc05412
Arrhythmogenic right ventricular cardiomyopathy
cjc05414
Dilated cardiomyopathy
cjc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100405465 (SNTA1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100405465 (SNTA1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100405465 (SNTA1)
05414 Dilated cardiomyopathy
100405465 (SNTA1)
05416 Viral myocarditis
100405465 (SNTA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100405465
NCBI-ProteinID:
XP_002806790
Ensembl:
ENSCJAG00000018516
UniProt:
A0A2R8PEC0
LinkDB
All DBs
Position
5:3805341..3838804
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AA seq
505 aa
AA seq
DB search
MASGRRAPRTGLLELRAGAGSGAGGERWQRVLLSLAEDVLTVSSADGDPGPDPGAPREPE
PAQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKG
LAADQTGALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKDVSPYFKNSA
GGTSVGWDSPPASPLQRQPSSPGPTPRNLSEAKHVSLKMAYVSKRCTPTDPEPRYLEICS
ADGQDTLFLRAKDEAGARSWASAIQAQVSALTPRVKDELQALLAATSPAGSQDIKQIGWL
TEQLPSGGAAPTLALLTEKELLLYSSLPETREALSRPARTAPLIATRLVHSGPSKGSVPY
DAELSFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRP
CSLSVHIDKGFTLWAAEPGAARAVLLRQPFEKLQMSSDDGASLLFLDFGGAEGEIQLDLH
SCPKTIVFIIHSFLSAKVTRLGLLA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcaggcgcgccccgcgtaccgggctgctggagctgcgcgccggggcgggc
tcgggggccggcggcgagcggtggcagcgagtgctgctgagtctggcggaggacgtgctg
accgtgagctccgccgacggcgaccctggccccgatcccggcgctccgcgggagccggag
cccgcgcagctgaacggcgccgcggagccaggcgccgggcccccgcagctgcctgaggcg
ctactgctccagcggcgccgcgtgacggtgcgcaaggccgatgccggtgggctgggcatc
agcatcaaaggcggccgggagaacaagatgcctattctcatttccaagatcttcaaggga
ctggcagctgaccagacaggggcgcttttcgtgggggatgccatcctgtctgtgaatggg
gaagacttgtcctctgctacccatgatgaggcagtgcaggccctcaagaagacaggcaag
gaggtggtgctggaggttaagtatatgaaggatgtctcaccgtatttcaagaactctgct
ggtgggacctcggttggctgggactcacctcctgcctcacctcttcagcggcagccttcc
tctcctggccccacaccccggaatctcagcgaggccaaacacgtgtctttgaagatggca
tatgtctcaaagaggtgcacccccactgacccggagcccaggtatctggagatctgctca
gcagatggccaagacaccctcttcctgagggccaaggatgaggctggtgcgaggtcgtgg
gcgagtgccatccaagcccaggtcagtgctctgacaccgcgggtcaaggatgagctacag
gcactgctggcagccaccagcccagctgggagccaggacatcaagcagatcggctggctg
actgagcagctgcccagtggaggcgcggcccccaccctggccctgctgactgaaaaggag
ctgctcctttactcttctctccctgagacccgcgaggccctgagccggccagcccgtact
gccccactcatcgccaccagactggtgcactcaggcccctccaagggctcagtgccctat
gatgcagagctctcttttgccctgcgcacgggcacgcgtcacggtgtggacactcacctg
ttcagcgtggagtcaccgcaggagctggctgcctggacccgccagctggtggatggctgt
caccgggccgccgagggtgtgcaggaggtgtctacagcctgcacgtggaacgggcgtccc
tgcagcctgtctgtgcacatcgacaagggcttcacactgtgggcggctgagccaggggca
gcccgagctgtgctcctgcgacaacccttcgagaagctgcagatgtcttcagatgatggc
gccagtctccttttcctggactttgggggtgctgaaggcgagatccagctggacctgcac
tcgtgtcccaaaaccatagtcttcatcatccactccttcctctcggccaaagtcacccgc
cttgggctcttggcctag
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