Callithrix jacchus (white-tufted-ear marmoset): 100405504
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Entry
100405504 CDS
T03264
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04512
ECM-receptor interaction
cjc04820
Cytoskeleton in muscle cells
cjc04974
Protein digestion and absorption
cjc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100405504 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100405504 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100405504 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100405504 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100405504 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100405504 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjc00535
]
100405504 (COL9A2)
Proteoglycans [BR:
cjc00535
]
Extracellular matrix (ECM) proteoglycans
Others
100405504 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100405504
NCBI-ProteinID:
XP_002750700
Ensembl:
ENSCJAG00000002851
UniProt:
F7HYE6
LinkDB
All DBs
Position
7:complement(73950947..73967895)
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AA seq
689 aa
AA seq
DB search
MAAAAAAPRSLLVLLQVLVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDKGPPGKAG
PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGP
PGPPGPVGLPGEIGIPGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPA
GMKGPPGLQGVKGHAGKRGVLGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
GPKGEMGPRGYKGMVGTIGTTGPPGEEGPRGPPGRAGEKGDVGSPGVRGPQGITGPKGAT
GPPGINGKDGTPGTAGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP
GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGQQGPKGEQGPPGIPGPQ
GLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGETGYPGPS
GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVAGRDATDQHIVDVALKMLQEQLAEV
AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKR
GEKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGRPGLPGPVGL
PGFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcggccgccccccgcagccttcttgtcctcctccaggtgctcgtgctc
gctctggcgcagatcagaggtccgccgggagagcgggggcccccaggccccccgggaccg
ccgggagtgcctggatccgacggcatcgacggtgacaagggcccccctggaaaagctggc
cctccgggacccaagggcgagcctggcaaagctgggccagatgggccagatgggaagcct
gggattgatggtttaactggagccaagggggaacctggccccatggggacccctggagtc
aagggccagcccgggcttcctggtcctcctggccttccaggccctggttttgctggacct
cctggaccacctggacctgttggcctccctggtgagattggaatcccaggccccaagggg
gaccctggaccagatggaccatcggggccaccaggaccccctgggaaacctggtcgccca
ggaaccatccagggtctggagggcagtgcggatttcctgtgtccaaccaactgtccagcc
gggatgaaaggtcccccagggctgcagggagtgaagggacatgcgggcaaacgcggggtt
ctgggtgatcctggccgccaggggaagccgggtcccaaaggagatgtgggtgcctccgga
gagcaaggcatccctggaccgccgggtccccagggcatcaggggctacccgggcatggca
gggccaaagggagagatgggcccacgtggatataaaggcatggtgggcaccatcggtacc
actgggcctccgggtgaggaaggtcccaggggaccaccaggccgagctggggagaagggt
gacgtgggcagcccaggtgttcgtggaccccaggggatcacaggcccaaagggagccacg
ggccccccaggcatcaacggcaaggatgggaccccaggcacggctggcatgaagggcagc
gcaggacaggtggggcggccaggaagcccaggccaccagggcctagcgggtgtgccaggc
cagcctgggacaaaaggaggccctggagatcagggtgagccgggcccacagggccttcct
ggattctctggtccccctgggaaagagggagagccagggcctcgaggagaaattggtccc
cagggcatcatgggacagaagggtgaccagggcgagaggggtccagtgggacagccaggc
cctcagggacagcagggccctaagggggagcagggcccccctggaattccagggccccaa
ggcttgccgggcatcaaaggagacaagggctccccagggaagaccgggccccgcggcgga
gtgggtgacccgggggtggccggccttcccggagagaaaggcgagaagggcgagtccggc
gagccggggcccaaaggacagcaaggagtccgtggagaaaccggctaccctggccccagc
ggggatgccggcgccccaggggttcagggctaccccggtccacccggccctcgaggactg
gccgggaaccgaggagtgccaggacagcctgggagacaaggcgtcgcgggccgggatgcc
actgaccagcacatcgtggatgtggcgctgaagatgctgcaagagcaactggcagaggtc
gctgtgagtgccaagcgagaagccctgggtgcggtgggcatgatgggtcccccaggacct
cctgggccccctgggtacccaggcaagcagggaccccatgggcaccctggccctcggggc
attcctggcatcgtgggagccgtgggtcagattggcaacacggggcccaagggaaaacgt
ggagagaagggtgatcaaggagaagtgggacgggggcaccccgggatgccagggccccca
gggatcccaggactccctggccggcctggtcaggccatcaatggcaaggatggagatcga
ggggctccaggggctccaggagaggcaggtcgacctggcctgccaggccccgtggggctg
ccgggcttctgtgaacctgcagcctgccttggagcttcggcctatgcctctgcccgcctt
acagagcccggatccatcaaggggccttga
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