Callithrix jacchus (white-tufted-ear marmoset): 100405517
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Entry
100405517 CDS
T03264
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100405517 (SAMD4A)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100405517 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
100405517
NCBI-ProteinID:
XP_035116453
UniProt:
U3E0Y5
LinkDB
All DBs
Position
10:85013803..85243817
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AA seq
718 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHILER
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYTS
PSTTPEARRREPQAPHQSSLMGSESQSPDCKDGATATGATATPSAGASGGLQPHQLSSCD
GELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKK
RLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQ
IPSRNVPSARLGLLGTSGFVSSNQRNTTAAPTIMKQGRQNLWFANPGGSNSMPSRTHSSV
QRTRSLPVHTSPQNMLMFQPPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcgctgctgtcgctgctcaagcgcgtgagccagacccaggcccgcttc
ctccagctctgcctggagcactcgctggccgactgcgccgaactgcacatcctcgaacgc
gaggccaacagccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcatctgcctttgctgaagccaggaaacctcgacgcaaaagtagaa
tatatgaaactgctgcccaaaatcctggctcactctattgaacacaaccagcacattgag
gagagcaggcagctgctgtcctatgctttgatacatccggccacttctttggaagaccgt
agtgctttagcaatgtggctgaatcacttggaggaccgcacatcgaccagctttggtggc
cagaaccgaggccgctcagactctgtggattatggacagacacactactatcaccaaaga
cagaactccgatgacaagctcaatgggtggcagaactctcgggattctgggatttgcatc
aatgcctccaactggcaggacaaaagcatggggtgtgagaatggccatgtgcccctctac
tcctcctcatctgtccccaccacaatcaatacaattggaaccagcacaagtacaattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
cctcagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcctggctaaaaagcctccgcctgcacaaatat
gccgcgcttttctcccagatgacctatgaggaaatgatggccctcactgagtgccagctg
gaggcgcagaatgttaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagaaagacagaatctcctgaagtctttggaaagggacatcatcgaggggggcagcctg
cgtatcccgctccaggaactgcaccagatgatcctgactcccatcaaggcctatacctcc
ccgagcaccaccccagaggctcgccgccgggagccccaggccccgcaccagtcctcactg
atgggctccgagagccagagccccgactgcaaagatggggccacagccaccggcgccaca
gccaccccctcggctggtgccagtggcgggctccagccgcaccagctgagcagctgcgat
ggggagctggccgtcgcccccctgccggagggggacctccctgggcagttcacacgcgtc
atggggaaagtgtgcacgcagctcttggtctccagacctgatgaggaaaatataagttcc
tatttacagctcatagacaagtgtctaattcatgaggcatttacagagacacagaaaaaa
agactgttgtcatggaaacagcaggtgcagaagctctttcggtctttccctcggaaaacc
cttctagacatatcaggatatcgacagcaaagaaatcgaggctttgggcagtccaactcc
ctcccgacagctggctctgtgggcggcggcatggggagacggaacccacgccagtaccag
atcccgtctcggaatgtcccgtccgcccgcctgggcctcttgggcaccagtggattcgtc
agttccaaccagcgcaacaccacagccgcccccaccataatgaaacaaggaagacagaac
ctgtggtttgccaaccctgggggcagcaatagcatgccaagccgcacccacagctcggtc
cagaggacccgctcgctgcccgtgcacacttccccacagaacatgctgatgttccagccg
ccagaattccagcttcctgtgaccgaacctgatatcaacaataggctggagtcgttgtgc
ctcagtatgaccgaacacgccctgggagacggggttgaccggacctccacaatctag
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