| Entry |
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| Symbol |
PAN3
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| Name |
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
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| KO |
| K12572 | PAB-dependent poly(A)-specific ribonuclease subunit 3 |
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| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100405730 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cjc03019]
100405730 (PAN3)
Messenger RNA biogenesis [BR:cjc03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100405730 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
100405730 (PAN3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:143368707..143531889
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| AA seq |
887 aa
MNSGGGLPPPSAAASPSSSSLAAAVAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCFY
GEECQFLHEDPAAGAVPGLSLHSNSVPLALAGAPVAGFPPGAVPGGGVGPPPGPKKPDLG
DPGAGAAAGGGGSSGGLDGPRLAITGMDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKY
PLMQRMTNSSSSPSLLNDSAKPYAGHDPLTSPASSLFNDFGALNISQRRKPRKYRLGMLE
ERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGST
SRLNNVSQSNMSAFSQVFSHPSMGSSATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRR
SHTPNPASYMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPN
YHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH
SLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMW
KKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQH
DGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVG
VFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTIN
YSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRL
FRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLN
KLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL |
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| NT seq |
2664 nt +upstreamnt +downstreamnt
atgaacagtggcggcggcctcccgcccccctcggccgccgcctccccttcctcctcctcg
ctggcggcggcagtggcggtggtggctccgccgggggtcgggggagtccccggcggggcg
gcggcaggagtgaagctgaagtactgccgctactacgccaaggataagacttgcttctac
ggggaggagtgtcagttcctgcatgaggacccagccgccggggctgtcccgggcctcagc
ctccatagcaacagcgtccccctggctctggcgggtgcacccgtggccggctttccgccc
ggagcggtcccgggcgggggagttgggccgccccccgggcccaagaagccggacctgggg
gacccgggggcaggagccgcagcaggcggaggaggcagcagcgggggactcgatggaccg
cggctggcaattacaggaatggatggaggtgctttaactgatacgagtctcacagattcc
tattttagcacaagctttattggagtcaatggatttggaagccctgtagaaacaaaatat
cccctgatgcagagaatgactaatagcagcagctccccaagccttctaaatgacagtgcc
aagccatatgcaggccatgatcctctaacttcacctgcttcatccttgtttaatgacttt
ggtgccctcaacatctctcagagacgaaagccaaggaagtatcgcctggggatgctggag
gagaggctagttccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgcctt
gctgacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatcctactgcaagcgagtttattcctaaaggaggatcaacc
tccaggctgaataacgtgtcccagtcaaatatgtctgccttctctcaagttttctctcac
ccatccatgggaagctctgccactgctggattagcgccaggaatgtcgttgtctgctggg
tcttcccctcttcattcccccaagattactccacatacttctcctgctcccagaagaaga
agtcacactccaaatccagcaagttacatggtgccttctagtgcctctacatctgtcaat
aatcctgtttctcagactccatcttctggtcaggtgatccaaaaggaaactgttggtggg
acgacttacttctatacagacacaactccagcacctttgactggaatggtgtttccaaac
tatcatatttatcctccaactgcacctcatgttgcttatatgcaaccgaaagcaaatgca
ccttccttcttcatggctgatgaactccgacaggaactgatcaacagacatttaataaca
atggctcaaattgatcaagcagatatgccagcagttcctacagaggttgacagctaccat
agcctattccctctagaaccactgccacctcccaaccggatacagaaatcaagtaatttt
gggtatattacatcttgctacaaagctgtaaatagcaaagatgatctgccatattgcctt
cggaggatacatggtttccgtcttgttaacacaaaatgcatggtgttggtcgacatgtgg
aagaaaatacagcattcaaatatcgtaactttgcgtgaagtatttaccactaaagcattt
gccgagccctctcttgtgtttgcatatgatttccatgctggaggagaaactatgatgagc
agacactttaatgaccctaatgctgatgcctatttcaccaagagaaagtggggtcaacat
gatggaccactgcccaggcagcatgctggattattgccagaatctcttatttgggcatat
attgtccaactaagttctgcgttgcgtaccattcatacagcaggtttggcatgtcgagtt
atggatccaacaaagattctgataactggcaaaacaaggttgcgagtaaattgtgttgga
gtttttgatgttttaacatttgataacagtcaaaataataatccattggcattaatggcc
cagtaccagcaagcagatctgatatcattaggaaaagttgtgttggctttggcttgcaac
tctttggcaggaattcagcgagagaatttacagaaagccatggaactggtgacaatcaac
tattcctctgacctgaagaatctgattttgtatttattgactgaccaaaacaggatgcga
agtgtaaatgacatcatgcccatgattggtgctcgattttatactcaattggatgctgct
caaatgagaaatgatgtcatagaggaagatcttgcaaaggaggttcaaaatggaagactg
tttaggctcctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatccc
acttggtcagagactggagaccgttatctgttgaaactctttagggatcatctttttcat
caggtgacagaagcaggtgctccctggattgacctcagtcatatcatttcttgtcttaac
aagctagatgctggtgtgccagaaaaaataagcctgatttctagagatgagaagagtgta
ctcgtggtgacctacagtgacttaaagcgttgctttgaaaatacttttcaagaactgatt
gcagctgcaaatggtcagttgtag |
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