Callithrix jacchus (white-tufted-ear marmoset): 100405811
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Entry
100405811 CDS
T03264
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04330
Notch signaling pathway
cjc05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100405811 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100405811 (NCSTN)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100405811
NCBI-ProteinID:
XP_002760216
Ensembl:
ENSCJAG00000005777
UniProt:
U3CT98
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All DBs
Position
18:13836897..13853215
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AA seq
709 aa
AA seq
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MATAVGVSGADPGSRGLLRLLSFCVLLAGLCRGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYMLLLESKLFTRDLMERLKGRTSRIAG
LAVSLTKPSPAVGFSPSVQCPNDGFGVYSNSYGPEFAHCKAVQWNLLGNGLAYEDFSFPI
FLLEDENETKVIKQCYQDHNLSQNGSAPTFPLCAMQLFSHMHAVISTATCMRRSSIQSTF
SINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRIVVAATRLDSRSFFWNVAPGAESTVA
SFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYDMEKGKFPVQLENID
SFVELGQVALRPSLELWMHTDPMSQKNESVRSQVEDLLDTLEKSGAGVPAVILRRPNQSQ
PLPPSSLQRFLRARNISGVVLADHSRAFQNKYYQSIYDTAENINVSYPEWLSPEEDLNFV
TDTAKALADVATVLGRALYELAGGTNFSDTVQADPQTVTRLLYGFLIRANNSWFQSILRQ
DLRSYLGDGPLQHYIAVSSPTNTTYVVQYALANLTGTVVNLTREQCQDPSKVPSENKDLY
EYSWVQGPLNSNETDRLPRCVRSTARLARALSPAFELSQWSSTEYSTWTESRWKDIRARI
FLIASKELEFITLIVGFGILIFSLIVTYCINAKADVLFIAPREPGAVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcagtgggtgtctctggggctgacccgggaagtcggggtctccttcgcctt
ctgtctttctgcgtcctactagcaggtttgtgcaggggaaactcagtggagaggaagata
tatatccccttaaataaaacagctccctgtgttcgcctgcttaacgccactcatcagatt
ggctgccagtcttcaattagtggagacacaggggttatccacgttgtagagaaagaagag
gacctgcagtgggtattgactgatggccccaaccccccttacatgcttctgctggagagc
aagctttttaccagggatttaatggagaggctgaaggggagaaccagtcgaattgctggt
cttgcagtgtccttgaccaagcccagtcctgctgtaggcttctctcctagtgtgcagtgc
ccaaacgatgggtttggtgtttactccaactcctatgggccagagtttgctcactgcaaa
gcagtacagtggaacttactgggcaatggtttggcttatgaagactttagtttccccatc
tttcttcttgaagatgaaaatgaaaccaaggtcatcaagcagtgctaccaagatcacaac
ctgagtcagaatggctccgcaccaaccttcccgctgtgtgccatgcagctcttctcacac
atgcacgctgtcatcagcactgccacctgcatgcgacgcagctccatccaaagcaccttc
agcatcaacccagaaatcgtctgtgaccctctgtctgattacaatgtgtggagcatgcta
aagcctatcaatacaactgggacattaaagcctgatgacaggattgtggttgctgccacc
cggctggatagtcgttccttcttctggaatgtggccccaggggccgaaagcacggtggct
tccttcgtcacccagctggctgcagctgaagctttgcaaaaggcacctgatgtgaccacc
ctgccccgcaatgtcatgtttgtcttctttcaaggggaaacttttgactacattggcagc
tcaaggatggtctacgatatggagaagggcaagtttcctgtgcagttagagaacattgac
tcatttgtggagctgggacaggtggccttaagaccttcactagagctttggatgcacaca
gatcccatgtctcagaaaaatgagtctgttcggagccaggtggaggatctcctggacaca
ttggagaagagtggtgctggcgtccctgctgtcatcctcaggaggccaaatcagtcccag
cctctcccaccatcttccctgcagcgatttcttcgagctcgaaacatctctggtgttgtt
ctggcagaccactctcgtgccttccaaaacaaatactaccagagtatttacgacactgct
gagaacattaatgtgagctatcctgaatggctgagccctgaagaggacctgaactttgta
acagacactgccaaggccctggcggacgtggccacagtgctgggacgtgctctgtatgag
cttgcaggaggaaccaacttcagcgacacagttcaggctgatccccaaacggttacccgc
ctgctctatgggtttctgattagagccaacaactcgtggttccagtctatcctaaggcaa
gacctaaggtcctacttgggtgacgggcctcttcaacattacatcgctgtctctagccct
accaacaccacttacgttgtacagtatgccttggcaaatttgactggcacggtggtcaac
ctcacccgagagcagtgccaggatccaagtaaagtcccaagtgaaaacaaggatctgtat
gagtactcatgggtccagggcccgttgaattccaatgagacggaccgactcccccggtgc
gtgcgttccactgcacgattagccagggccttgtctcctgcctttgaactgagtcagtgg
agctctactgaatactctacatggactgagagccgctggaaagatatccgtgcccgaata
tttctcattgccagcaaagagcttgagtttatcaccctgatagtgggcttcggcatcctc
atcttctctctcatcgtcacctactgcatcaatgccaaagctgatgtccttttcattgct
ccccgggagccaggagccgtgtcatactga
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