Callithrix jacchus (white-tufted-ear marmoset): 100405811
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Entry
100405811 CDS
T03264
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04330
Notch signaling pathway
cjc04519
Cadherin signaling
cjc05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100405811 (NCSTN)
09133 Signaling molecules and interaction
04519 Cadherin signaling
100405811 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100405811 (NCSTN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100405811
NCBI-ProteinID:
XP_002760216
Ensembl:
ENSCJAG00000005777
UniProt:
U3CT98
LinkDB
All DBs
Position
18:13836897..13853215
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AA seq
709 aa
AA seq
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MATAVGVSGADPGSRGLLRLLSFCVLLAGLCRGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYMLLLESKLFTRDLMERLKGRTSRIAG
LAVSLTKPSPAVGFSPSVQCPNDGFGVYSNSYGPEFAHCKAVQWNLLGNGLAYEDFSFPI
FLLEDENETKVIKQCYQDHNLSQNGSAPTFPLCAMQLFSHMHAVISTATCMRRSSIQSTF
SINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRIVVAATRLDSRSFFWNVAPGAESTVA
SFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYDMEKGKFPVQLENID
SFVELGQVALRPSLELWMHTDPMSQKNESVRSQVEDLLDTLEKSGAGVPAVILRRPNQSQ
PLPPSSLQRFLRARNISGVVLADHSRAFQNKYYQSIYDTAENINVSYPEWLSPEEDLNFV
TDTAKALADVATVLGRALYELAGGTNFSDTVQADPQTVTRLLYGFLIRANNSWFQSILRQ
DLRSYLGDGPLQHYIAVSSPTNTTYVVQYALANLTGTVVNLTREQCQDPSKVPSENKDLY
EYSWVQGPLNSNETDRLPRCVRSTARLARALSPAFELSQWSSTEYSTWTESRWKDIRARI
FLIASKELEFITLIVGFGILIFSLIVTYCINAKADVLFIAPREPGAVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcagtgggtgtctctggggctgacccgggaagtcggggtctccttcgcctt
ctgtctttctgcgtcctactagcaggtttgtgcaggggaaactcagtggagaggaagata
tatatccccttaaataaaacagctccctgtgttcgcctgcttaacgccactcatcagatt
ggctgccagtcttcaattagtggagacacaggggttatccacgttgtagagaaagaagag
gacctgcagtgggtattgactgatggccccaaccccccttacatgcttctgctggagagc
aagctttttaccagggatttaatggagaggctgaaggggagaaccagtcgaattgctggt
cttgcagtgtccttgaccaagcccagtcctgctgtaggcttctctcctagtgtgcagtgc
ccaaacgatgggtttggtgtttactccaactcctatgggccagagtttgctcactgcaaa
gcagtacagtggaacttactgggcaatggtttggcttatgaagactttagtttccccatc
tttcttcttgaagatgaaaatgaaaccaaggtcatcaagcagtgctaccaagatcacaac
ctgagtcagaatggctccgcaccaaccttcccgctgtgtgccatgcagctcttctcacac
atgcacgctgtcatcagcactgccacctgcatgcgacgcagctccatccaaagcaccttc
agcatcaacccagaaatcgtctgtgaccctctgtctgattacaatgtgtggagcatgcta
aagcctatcaatacaactgggacattaaagcctgatgacaggattgtggttgctgccacc
cggctggatagtcgttccttcttctggaatgtggccccaggggccgaaagcacggtggct
tccttcgtcacccagctggctgcagctgaagctttgcaaaaggcacctgatgtgaccacc
ctgccccgcaatgtcatgtttgtcttctttcaaggggaaacttttgactacattggcagc
tcaaggatggtctacgatatggagaagggcaagtttcctgtgcagttagagaacattgac
tcatttgtggagctgggacaggtggccttaagaccttcactagagctttggatgcacaca
gatcccatgtctcagaaaaatgagtctgttcggagccaggtggaggatctcctggacaca
ttggagaagagtggtgctggcgtccctgctgtcatcctcaggaggccaaatcagtcccag
cctctcccaccatcttccctgcagcgatttcttcgagctcgaaacatctctggtgttgtt
ctggcagaccactctcgtgccttccaaaacaaatactaccagagtatttacgacactgct
gagaacattaatgtgagctatcctgaatggctgagccctgaagaggacctgaactttgta
acagacactgccaaggccctggcggacgtggccacagtgctgggacgtgctctgtatgag
cttgcaggaggaaccaacttcagcgacacagttcaggctgatccccaaacggttacccgc
ctgctctatgggtttctgattagagccaacaactcgtggttccagtctatcctaaggcaa
gacctaaggtcctacttgggtgacgggcctcttcaacattacatcgctgtctctagccct
accaacaccacttacgttgtacagtatgccttggcaaatttgactggcacggtggtcaac
ctcacccgagagcagtgccaggatccaagtaaagtcccaagtgaaaacaaggatctgtat
gagtactcatgggtccagggcccgttgaattccaatgagacggaccgactcccccggtgc
gtgcgttccactgcacgattagccagggccttgtctcctgcctttgaactgagtcagtgg
agctctactgaatactctacatggactgagagccgctggaaagatatccgtgcccgaata
tttctcattgccagcaaagagcttgagtttatcaccctgatagtgggcttcggcatcctc
atcttctctctcatcgtcacctactgcatcaatgccaaagctgatgtccttttcattgct
ccccgggagccaggagccgtgtcatactga
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