Callithrix jacchus (white-tufted-ear marmoset): 100405911
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Entry
100405911 CDS
T03264
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X2
KO
K15623
protein SSXT
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082
ATP-dependent chromatin remodeling
cjc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100405911 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100405911 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100405911 (SS18)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100405911 (SS18)
GBAF(ncBAF) complex
100405911 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100405911
NCBI-ProteinID:
XP_002757176
Ensembl:
ENSCJAG00000020695
UniProt:
U3FL36
LinkDB
All DBs
Position
13:complement(64192599..64344120)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPAPRSHNMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVSSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYSMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcgaggcaagggggagatcacacccgctgcg
attcagaagatgttggatgacaacaaccatcttattcagtgtataatggactctcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcacacaaacttggtatac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctccccccgctccacgc
tctcacaacatgtcttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccatggatccatg
ggaggttacaaccattccgtgtcatcatcacagagcatgccagtacagaatcagatgaca
atgagtcaagggcaaccaatggggaactatggtcccagaccaaatatgaatatgcagcca
aaccaaggtccaatgatgcatcagcagcctccttctcagcaatacagtatgccacaggga
ggcggacagcattaccaaggacagcagccacctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccctatagacctcctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacagtatggccaacagcaggatgcataccagggaccacct
ccacaacagggatatccaccccagcagcagcagtacccagggcagcagggttacccagga
cagcagcagggctatggtccttcacagggtggtccaggtcctcagtatcctaactaccca
cagggacaaggtcagcagtatgggggatatagaccaacacagcctggaccaccacagcca
ccccagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
