Callithrix jacchus (white-tufted-ear marmoset): 100405926
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Entry
100405926 CDS
T03264
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100405926 (SHANK3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
Ank_5
PDZ_6
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
100405926
NCBI-ProteinID:
NP_001254692
UniProt:
B3Y6D6
LinkDB
All DBs
Position
1:216753462..216810586
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AA seq
1731 aa
AA seq
DB search
MDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNHSLQDALNYGLFQPPS
RGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTKANLKKFM
DYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDLLKVLKNGGAHLDFRT
RDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCCELLLHDH
AQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQESCAR
VLLFRGANRDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRETPSYAKRRRLAG
PSGLASPRPLQRSASDINLKGEAQPAASPGPSLRSLPHQLLLQRLQEEKDRDRDADQESN
ISGPLVGRGSQSKISPSGPGGPGPAPGPGPAPPAPPAPPPRGPKRKLYSAVPGRKFIAVK
AHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQHDTRPETR
EDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAVLQKRDHEGFGFVLRGAKAETPIEEFTP
TPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNRLVMK
VVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDEMLAA
ATEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGIPRT
KSVGEDEKLASLLEGRFPRSTSMQDPVLRESRGIPPPPQTAPPPPPAPYYFDSGPPPAFS
PPPPPGRAYDTVRSSFKPGLEARLGAGAAGLYDPGAALGPLPYPERQKRARSMIILQDSA
PETSDVPRPPPAGTPPERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQLQ
VEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGAGDGPGLAFGGPGPAKDRR
LEERRRSTVFLSVGAIEGSAPSADLPSLQPSRSIDERLLGTGPTAGRDLLLPSPVSALKP
LVSGPTLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDADRP
GPLFVDVQARDPERGSLASPAFSPRSPAWIPVPARREAEKAPREERKSPEDKKSMILSVL
DTSLQRPAGLIVVHATSNGQEPSRLGAEEERPGTPELAPAPMQSAAVAEPLPSPRAQPPG
STPAEPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANGVLLA
TPLAGPGPSPTTVPSPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLETTSTISTVS
SMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSSDS
ELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVISELSSR
LQQLNKDTRSLGEEPVGGLGGLLDPVKKSPIAAARLFSSLGELSSISAQRSPGGPGGGAS
YSVRPSGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGLTPPTILKSSSLSIPHEP
KEVRFVVRSVSARSRSPSPSPLPSPASGPGPGAPGPRRPFQQKPLQLWSKFDVGDWLESI
HLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLDGS
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggacggccccggggccagcgccgtggtcgtgcgcgtcggcatcccggacctgcagcag
acgaagtgcctgcgcctggacccgaccgcgcccgtgtgggccgccaagcagcgcgtgctc
tgcgccctcaaccacagcctccaggacgcgctcaactatgggcttttccagccgccctcc
cggggccgcgccggcaagttcctggacgaggagcggctcctgcaggactacccgcctaat
ctggacacgcccctgccctacctggagtttcgatacaagcggcgagtttatgcccagaac
ctcatcgatgataagcagtttgcaaagcttcacacaaaggcgaacctgaagaagttcatg
gactatgtccagctgcatagcacagacaaggtggcccgcctgctggacaaggggctggac
cccaacttccatgaccctgactcaggagagtgccccctgagccttgcagcccagctggac
aatgccacggacctgctgaaggtgctgaagaacggcggtgcccacctggactttcgcact
cgtgatgggctcactgctgtgcactgtgccacacgccagcggaatgcagcggcattgacg
accctgctggacctgggggcatcacctgactacaaggacagccgcggcttgacacccctc
taccacagcgccctggggggtggggatgccctctgctgtgagctgcttctccacgaccat
gctcagctggggaccaccgacgagaatggctggcaggagatccaccaggcctgccgcttc
gggcacgtgcagcacctggagcacctgctcttctacggggcagacatgggggcccagaac
gcctcagggaacacagccctgcacatctgtgccctctacaaccaggagagctgtgctcgt
gtcctgctcttccgtggagccaacagggatgtgcgtaactacaacagccagacagccttc
caggtggccatcatcgcagggaactttgagcttgcagaggttatcaagacccacaaagac
tcggatgttgtaccattcagggaaactcccagctatgcgaagcggcggcgactggctggc
cccagtggcttggcatcccctcggcctctgcagcgctcagccagcgatatcaacctgaag
ggggaggcgcagccggcagcttctcctggaccctcgctgagaagcctcccccaccagctg
ctgctccagcggctgcaggaggagaaagatcgtgaccgggatgccgaccaggagagcaac
atcagtggccccttagtaggcaggggcagccagagcaagatcagcccgagcgggcctggc
ggccctggccctgcgcccggccccggccccgcgccccccgcgccccccgcgccgccgccc
cggggcccgaagcggaaactttacagcgcagtccccggccgcaagttcatcgctgtgaag
gcgcacagcccgcagggcgaaggcgagatcccgctgcaccgcggagaggccgtgaaggtg
ctcagcattggggagggcggtttctgggagggaaccgtgaaaggccgcacgggctggttc
ccggctgactgcgtggaggaggtgcagatgaggcagcatgacacgaggcctgaaacccgt
gaggaccggacaaagcggctttttcggcactacactgtgggctcctacgacagcctcacc
tcacacagcgattatgtcattgatgacaaagtggccgtcctgcagaaacgggaccacgag
ggctttggttttgtgctccggggagccaaagcagagacccccatcgaggagttcacgccc
acaccagccttcccagcgctgcagtatcttgagtcggtggacgtggagggtgtggcctgg
aaggccgggcttcgcacaggagacttcctcattgaggtgaatggggtgaacgtggtgaag
gttggacacaagcaggtggtagctctgatccgccagggtggcaaccgccttgtcatgaag
gttgtgtctgtgacaagaaagccggaagaggatggggctcggcgcagagccccaccgccc
cccaagagggcccccagcaccacactgaccctgcgctccaagtccatgacagctgagctc
gaggaacttgcctccattcggagaagaaaaggggagaagctggacgagatgctggcagcc
gccacagagccgacgctgaggccagacatcgcagacgcggactccagagccgccacagtc
aaacagcggcccaccagtcggaggatcacacctgctgagattagttcattgtttgaacgc
cagggcctcccaggcccagagaagctgccgggctccttgcggaaggggattccacggacc
aaatctgtaggggaggacgagaagctggcgtccctgctggaagggcgcttcccgcggagc
acgtcgatgcaagacccggtgctgcgcgagagtcgcggcatcccgcccccgccgcagacc
gcgccgccgcccccgcccgcgccctactacttcgactcggggccgcccccggccttctcg
ccgccgcccccgccgggccgcgcctacgacacggtgcgctccagcttcaagcccggcctg
gaggcgcgcctgggcgcgggggctgccggcctgtacgatcccggcgcggccctcggcccg
ctgccctaccccgagcggcagaagcgcgcgcgctccatgatcatcctgcaggactcggcg
ccggagacgagcgacgtcccccggcccccgcccgcaggcaccccgcccgagcgccccaag
cgccggccgcggccgcccggccccgacagcccctatgccaacctgggcgccttcagcgcc
agcctcttcgcgccgtccaagccgcagcgccgcaagagcccgctggtgaagcagctgcag
gtggaggatgcgcaggagcgcgcggccctggccgtgggcagccccgggcccggcggcggc
agcttcgcacgcgagccctccccgacccaccgtggtccccgacccggcggcctcgactac
ggcgcgggcgacggcccggggctcgcgttcggcggcccgggcccggccaaggaccggcgg
ctggaggagcggcgccgctccactgtgttcctgtccgtgggcgccatcgagggcagcgcc
cccagcgcggacctgccatccctgcagccctcccgctccatcgacgagcgcctcttgggc
accggccccaccgccggccgcgacttgctgctgccctccccggtgtctgctctgaagcca
ttggtcagcggcccgaccctcgggccctcaggctccaccttcatccacccgctcaccggc
aaacccctggaccccagctcacccctggcccttgccctggctgcccgagagcgggctctg
gcctcccaggcaccctcccggtcccccacgcccgtgcacagccccgacgccgaccgccct
ggacccctgtttgtggatgtgcaggcccgggacccagagcgagggtccctggcgtcgcca
gccttctccccgcgaagcccggcctggattcctgtgcctgctcgcagggaggcagagaag
gccccccgggaggagcggaagtcacctgaggacaagaagtccatgatcctcagcgttctg
gacacatccctgcagcggccagccggcctcatcgttgtgcatgccaccagcaacgggcag
gagcccagcaggctgggggccgaagaggagcgcccgggcaccccggagttggccccggcc
cccatgcagtcagcggctgtggctgagcccctgcccagcccccgggcccagccccctggc
agcaccccggcagaacctgggccaggtcagggcagctcagaggaagagccagagctggtg
tttgctgtgaacctaccacccgctcagctgtcgtctagcgatgaggagaccagggaggag
ctggcccggattgggctggtgccacccccagaagagtttgccaacggggtcctgctggcc
accccactcgctggcccgggcccctcgcccaccacggtgcccagcccggcctcagggaag
cccagcagtgagccaccccctgcccctgagtctgcagccgactccggggtggaggaggct
gacacacgcagctccagcgacccccacctggagaccacaagcaccatctccacggtgtcc
agcatgtccaccttgagctcagagagcggggaactcactgacacccacacctccttcgct
gacggacacacttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtcc
ccgctggggaaggggccggtgaccttcagggacccgctgctgaaacagtcctcggacagc
gagcttatggcccagcagcaccatgccgcctctgccgggctggcctctgccgccgggcct
gcccgccctcgctacctcttccagagaaggtccaagctatggggggaccccgtggagagc
cgggggctccctgggcctgaagacgacaaaccaactgtgatcagtgaactcagctcccgc
ctgcagcagctgaacaaagacacgcgttccctgggggaggaaccagttggtggcctgggc
ggcctgctggaccctgtcaagaagtcgcccatcgcagcagctcggctcttcagcagcctc
ggtgagctgagctccatttcagcgcagcgcagccccgggggcccgggcggcggggcctcc
tactcggtgaggcccagcggccgctaccccgtggcgcgacgcgccccgagccctgtgaag
cccgcgtcgctggagcgggtggaggggctgggggcgggcgcggggggagcagggcggccc
ttcggcctcacgccccccaccatcctcaagtcgtccagcctctccatcccgcacgagccc
aaggaggtgcgcttcgtggtgcgcagcgtgagcgcacgcagccgctccccctcgccatcg
ccgctgccctcgcccgcgtccggccccggccccggcgcccccggcccgcgccggcccttc
cagcagaagccgctgcagctctggagcaagttcgacgtgggcgactggctggagagcatc
cacctgggcgagcaccgtgaccgcttcgaggaccatgagatcgaaggcgcgcacctcccc
gcgctcaccaaggacgacttcgtggagctgggcgtcacgcgcgtgggccaccgcatgaac
atcgagcgcgcgctcaggcagctggacggcagctga
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integrated database retrieval system
