Callithrix jacchus (white-tufted-ear marmoset): 100406006
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Entry
100406006 CDS
T03264
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X3
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100406006 (PIF1)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100406006 (PIF1)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100406006 (PIF1)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100406006 (PIF1)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
100406006 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
PH_LRR1
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
RsgA_GTPase
ABC_tran
AAA_16
PhoH
Mg_chelatase
AAA_24
AAA_7
T2SSE
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
100406006
NCBI-ProteinID:
XP_017832144
Ensembl:
ENSCJAG00000005214
LinkDB
All DBs
Position
10:complement(9050589..9063391)
Genome browser
AA seq
657 aa
AA seq
DB search
MTPGLRSLRRPAEAVAMLSGTEAAAGDYEDSELRCRVAVEELSPGGQPRRRQALRTAELS
LGRNERRELMLRLQAPGPAGRLRYFPLRAARLFTRFAAAGRSTLRLPTQGAPGAGAVQLL
LSDCPPDRLRRFLRTLRLKLAAAPGPGPASARAQLLGPRPLDFVTISPVQPEERRLGAAT
QVPDTTMVKRPVEPQAGAEPSTEAPRWPLPVKRLSLPSTKPQLSEEQASVLRAVLKGQSI
FFTGSAGTGKSYLLKRILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQC
VALAQRPGVRQSWLNCQRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDF
LQLPPVTKGSQPPRFCFQAKSWKRCVPVTLELTKVWRQADQTFISLLQAVRLGRCSDEVT
RQLQATAAHKVGRDGIVATRLCTHQDDVALTNQRRLQELPGKVHRFEATDSNPELASTLD
AQCPVNQLLQLKLGAQVMLVKNLSVSRGLVNGARGVVVGFEAEGRGLPQVRFLCGVTEVI
RTDRWTVQVTGSQLLSRQQLPLQLAWAMSIHKSQGMTLDCVEISLGRVFASGQAYVALSR
ARSLQGLRVLDFDPMAVRCDPRVLHFYATLRRGRSLSLESPDGDEAASDQENTDPNL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgggctccgttctcttcgcagacctgcagaggcggtggcgatgctttctggc
acggaggcggcggcaggggactacgaggactcggagctgcggtgccgtgtggctgtggag
gagctgagcccgggcgggcagccgcgaaggcgccaagccctgcgcaccgcggagctgagc
ctgggtcgcaacgagcgccgcgagttgatgctgcgactgcaggcgccggggcccgcaggg
cggctgcgctacttccctctgcgcgccgcgcgcctcttcacgcgtttcgccgctgctggg
cgcagcaccctgcggctcccgactcaaggcgccccaggggccggcgcggtgcagctgctg
ctctccgactgccccccggaccgcctgcgccgtttcctgcgcacattgcgcctcaagctg
gctgcggccccgggtcccgggcccgcctctgcccgcgcacagctgctgggcccgcggccc
ctcgacttcgtcaccatcagccctgtgcagcctgaggagcggcggcttggggcagccacc
caggttccggacaccacaatggtgaagcggcctgtggagccccaggcaggggccgagcct
agcacagaagccccaaggtggcccctgcctgtgaagaggctgagcttaccctccaccaag
ccacagctttctgaggaacaggcctctgtgctgagggccgtcctgaaaggccagagcatt
ttcttcactgggagtgcaggaacagggaagtcatatctgctgaagcgaatactgggctca
ctgccccccacaggcactgtggccactgccagtactggggtggcagcctgccacatcggg
ggtaccacccttcatgcctttgcaggcatcggctcaggccaggctcctctcgcccagtgt
gtggccctggcccaaaggccgggcgtgcggcagagctggctgaactgccagaggttggtc
attgatgagatctcaatggtggaggcagacctgtttgacaaactggaggccgtggccaga
gctgtccggcagcagaacaaaccatttggagggatccagctcatcatctgtggggacttt
ctgcagctgccacctgtgacgaagggctcccagcccccacggttctgcttccaggccaag
agctggaagaggtgtgtgccagtgaccctggagctgaccaaggtttggaggcaggcagac
cagaccttcatttctctactgcaggccgtgaggctgggcaggtgctcagatgaggtgacc
cgccagctccaggccacagctgcccacaaggtggggcgagatgggattgtggccacgagg
ctctgcacccaccaggatgacgtggccctcaccaaccagaggcggctgcaggagctgcca
ggtaaggtacacagatttgaggctacggacagcaaccctgagctagccagtaccctggat
gcccagtgtcctgttaaccagctccttcagctaaagctgggagcccaggtgatgctggtg
aaaaacttatcagtgtctcggggcctggtgaacggtgcccgaggggtggtagtcgggttt
gaggctgaagggagagggctaccccaggtgcggttcctgtgtggagtcaccgaggtcatc
cgcactgaccgctggacagttcaggtcaccgggagccagctccttagccggcagcagctg
cccctccagctggcttgggcgatgtccatccacaagagccaaggcatgaccctggattgt
gtggagatttctctgggccgggtgtttgccagtggccaggcctatgtggccctttcccgg
gcccgcagcctgcagggcctacgtgtgctggactttgaccccatggcagttcgctgtgac
ccccgcgtgctgcacttctatgccaccctgcggcggggcaggagcctcagtctggagtcc
ccagatggtgacgaggcagcctcagaccaggagaacacggacccaaacctctga
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