Callithrix jacchus (white-tufted-ear marmoset): 100406255
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Entry
100406255 CDS
T03264
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X4
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100406255 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100406255 (CHD8)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100406255 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100406255
NCBI-ProteinID:
XP_002753816
Ensembl:
ENSCJAG00000009002
UniProt:
A0A5K1TW24
LinkDB
All DBs
Position
10:complement(51675463..51745047)
Genome browser
AA seq
2583 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGNVGN
SSASDLVPPPEETSPTELPKESTTPAPESITLHDYTTQPASQEQPAQPVLQTSTPTSGLL
QVSKNQEILSQGNPFMGVSATAVSSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLMAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQAAVQRIVQ
PNRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPVKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSAPHSGGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSAGERLKEEKPKKNKTSGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHA
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTL
FQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEV
PTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSD
IVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP
PGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTR
REQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRL
PPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALCQPPGPEL
PKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAPAPSLSRC
STPLLHQQYTSRTASPLPLRPDAPVEKSPEETAAQVPSLESLTLKLEHEVVARSRPIPQD
YEMRIAPSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESED
EKEEKLTDQSHSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRVL
INRIDLVCQAVLSGKWPSSRRSQEMITGGILGPGNHLLDSPSLTPGEYGDSPVPTPRSSS
AASMAEEEASAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVMGDGH
PLFHKKKGNRKKLVELEVECVEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRAELEMW
LQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMETVQTANSRNGKKGHHTET
VFNRVLPGPIAPESSKKRARRMRPDLSKMMALMQGGSTGSLSLHNTFQHSSSGLQSVSSL
GHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHPHHHHHHHPGLRAPGYPS
SPATTTSGTTLRLPSLQPEEDDDEDEGDDDDLSQGYDSSERDFSLIDDPMMPANSDSSED
ADD
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgttcgatgacccaaatttatttggcctggactctctg
actgatgacagctttaaccaggtcacacaagaccctattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggatggcggaggtggtaatgtggggaat
tcatcagcaagtgacctggtgcccccaccagaggaaacatctcccacagaacttcccaaa
gaatccacaactccagctccagaatccataaccttgcatgattataccactcagcctgcc
agccaggagcagccagcccaacctgtcttacagacatcgacgccaacatcaggacttttg
caggtctccaagaaccaggagatcctgagccaagggaatccttttatgggtgtctctgcc
acagctgtctcctctagtagtgctggagggcagccacctcaatcagcccctaagattgtt
atccttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggct
caaggtatcaccagcacagctcagcccctgatggcaggcacagccaatggtggaaaagtc
acttttaccaaagtgctaaccggcacgccccttcgaccaggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctgctgttcagcgcattgtccag
cccaaccgaccagtaaagcagctggtccttcagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcaaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaa
ggacatcggcatgttgtgctagggagtctaccaggcaagatagtattacagggcaaccag
ctggcagccctgactcaagccaagaatgcccaggggcagcctgccaaagtagtaactatc
cagctgcaggtgcagcagccacagcaaaaaatccagattgtaccacaaccaccatcatcg
cagccccagccccagcagccaccgtcaacccagccagtgactctatcctctgtacagcag
gctcagataatgggaccaggacaaagcccaggacaaagactttcagtaccagtcaaggtg
gtactgcagccacaggctggctcttcccaaggggcctcttctgggctctctgtagttaaa
gttttaagtgccagtgaagtggcagctttgtcatcaccagcaagctctgctcctcattct
gggggaaagacaggaatggaggaaaaccgcagattggaacaccagaagaagcaagagaaa
gcaaatcggattgtggcagaggccattgcaagggcccgtgcccggggtgagcagaacata
cctcgagtcttgaatgaggatgagttgcccagtgttcggccagaggaggaaggtgagaag
aaacgcaggaagaagagcgctggggagaggctgaaagaggaaaagccaaagaagaacaaa
acatctggtacctccaaaacaaaaggcaagagtaagctaaacaccatcactcctgtagtg
ggtaagaagagaaaacgtaatacctcatctgataattcagatgtggaagtcatgcctgca
caatcacctcgggaagatgaagaaagcagcattcagaagagacgctcaaaccgccaagtt
aaacgaaaaaaatatacagaggacctggatataaagatcacagatgatgaagaagaagaa
gaggtggatgtaactggtccaataaaacctgagcctattctccctgaaccagtgcaagaa
ccagatggcgagactttgccttccatgcagttctttgtggagaatcccagtgaagaagat
gcagccattgtagacaaagtgctttctatgcggattgtgaagaaggagcttccttctgga
caatatactgaagcagaagaattctttgtcaagtacaagaactattcctatctgcactgt
gaatgggctactatctcccaactagagaaggataagaggatccatcaaaaattaaagcgc
ttcaaaaccaaaatggctcagatgagacatttcttccatgaggatgaagagccctttaat
ccagactacgtagaggtggataggatattggatgagtctcacagtattgacaaggacaat
ggggagcctgttatttactacctggtgaaatggtgctctctgccctatgaagatagcaca
tgggagctaaaagaggatgttgatgagggcaagattcgcgaatttaaacggattcagtca
aggcacccagaactcaaaagggtgaatcgtccgcaggcaagtgcctggaagaaattggag
ctgtcgcatgaatataaaaacagaaaccagttacgggaatatcagttggaaggggtcaat
tggctgctctttaattggtataacaggcagaactgcatcctggctgatgagatgggattg
ggcaaaactattcagtccattgccttcttgcaggaagtatataatgtgggcatccatggc
cccttcttggtcattgccccattgtcaacaattactaactgggagcgagaatttaataca
tggacagaaatgaacactattgtgtaccatggcagcctggccagcaggcagatgattcag
caatatgaaatgtactgcaaagattcacggggacgcctcatcccaggtgcatacaagttt
gacgccctgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgaaatt
gaatggcgttgtgtcatcattgatgaggcccatcgactgaaaaatcgtaattgcaagctg
cttgatagtcttaagcacatggacctggaacacaaagtgctactcacaggaacaccattg
caaaatactgtagaagaactgtttagcttgcttcatttcttagaaccgtcacaatttccc
tcagaatcagagtttctcaaggactttggggatctaaagacagaggaacaggttcaaaag
ctacaggccattcttaagccaatgatgctgagaagactcaaagaggatgttgaaaaaaac
ttggcacccaaacaggaaactattattgaagtagagctgactaacatccagaagaaatat
tatcgggctattttggagaagaatttctccttcctttcgaaaggagcaggtcataccaac
atgcctaatctacttaacacaatgatggagttgcgcaagtgctgcaaccacccatatctc
atcaatggtgccgaagaaaaaatcctaacagaattccgcgaagcttgccatattatacct
catgacttccacctgcaggccatggttcgttcagctggcaaactggttcttattgacaag
ttacttccaaagcttaaagctggtggccataaagttctgatcttctctcagatggtacgc
tgcctagatatcctagaggattatttaatccagaggaggtacttatatgaacgtattgat
gggcgagttagagggaaccttcgacaggctgccattgaccgcttcagcaaacctgactca
gaccgctttgtcttcttactatgtacccgggctggtggacttggtattaatcttacagct
gctgatacctgcattatctttgattcagactggaatccacaaaatgacctgcaggcccaa
gcacgatgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgcctcatcactcgt
aattcctatgagagagaaatgtttgataaggccagcctcaagttaggattggataaggct
gtgcttcagtccatgagtggtcgggatggcaacattactggaatccaacagttctctaag
aaggagattgaagatcttttaagaaaaggagcatatgcagccatcatggaggaagatgat
gaaggttccaagttctgtgaagaggacatcgaccagatcttgttaagacgaactactacc
atcaccattgaatctgaaggaaaaggttctacctttgccaaggcaagctttgttgcctct
gaaaacaggacagatatttctttggatgaccccaacttttggcaaaagtgggccaaaaag
gctgacctagacatggatcttctcaatagtaagaataatttggtaattgacacacctaga
gtacgaaaacagacacgccacttcagcactctgaaagatgatgatctggtggaattctct
gatttggaaagtgaggatgacgagcggccacgctcccgcagacatgaccgtcatcatgcc
tatgggcgcactgactgctttcgggtggaaaagcatctcctggtatatggttggggacga
tggcgagatatcttatcccatggacgcttcaagcgacgtatgactgaacgagatgtggag
acaatttgccgggccattctcgtgtactgtcttctacattaccgtggggatgaaaatatt
aagggctttatctgggacttgattagcccagctgaaaatggcaagacaaaagaattgcag
aatcattcaggtttatctatccctgtgcctcgcggacgcaagggaaaaaaagtaaagtca
caaagtacttttgatatccataaggcagattggatccggaaatataaccctgacacgctg
ttccaagatgaaagttataagaagcacttgaaacatcagtgtaacaaggtactgttgcgg
gtacgaatgctatactacctgaggcaggaggttattggagaccaagcagagaaggtgtta
gggggtgccattgccagtgagattgacatatggttcccagtagtggatcagctggaggtt
ccaacaacatggtgggacagtgaggctgacaagtcactgctcattggagtctttaaacat
ggctatgagaaatataatactatgagggcagacccagccttatgtttcctagaaaaggct
ggccgaccagatgacaaagcaattgcagcagaacaccgagtgttggataacttctctgac
atagtagaaggggttgactttgataaagattgtgaagatcctgaatataaaccactccag
ggtcccccaaaggaccaagatgatgagggtgatcccttgatgatgatggatgaggagatc
tcagtgattgatggagatgaagcccaggtgacccaacagccagggcatttattctggcct
ccaggctctgccctaacagctaggcttcggcgcctagtaacagcatatcagcgcagctac
aagagagaacagatgaagatagaggctgcagaacgtggggatcggcgaagacgccgttgt
gaagcagccttcaagctgaaagaaattgcacggcgggagaaacaacaacgatggacaagg
cgtgaacaaactgatttttatcgagtggtatctacctttggtgtggaatatgaccctgac
accatgcagttccattgggatcgcttccgcacttttgctcgactagacaaaaaaacagat
gaaagccttaccaagtacttccatggctttgtggccatgtgccgccaagtatgccgcctt
cccccagcagctggagatgaacccccagaccctaatctgttcattgagcccatcactgag
gagagagcctcacggactctctaccgaatcgaattgcttcggcgcttaagggaacaagtt
ttatgccacccccttttggaagatcggctggcattgtgtcagcctccaggtcctgaattg
cccaaatggtgggagcctgttcggcatgatggggaacttctacgaggcgcagcccgccat
ggggtgagccaaacagactgcaacatcatgcaggacccagacttctcttttctagctgcc
cgtatgaattatatgcagaaccatcaagcaggagcaccagctccatccttgtcacgctgc
tctactccactgctgcaccagcagtatacctcacgtactgcctcaccattgcccctgcgc
ccagatgctcctgtagaaaagtcacccgaggagacagctgcccaggtccccagtctggag
agtctgactttaaagctagagcatgaggtggtggccaggagccgaccaatcccacaagac
tatgagatgcgaatagccccctctgatactacccctctggtttcccggagtgttccacca
gtcaaactggaggatgaggatgattcagactctgagctggacttgagcaagctgtcacca
tcatcctcttcttcctcatcctcatccagctccagctccagcactgatgagagtgaggac
gagaaggaagagaagctaactgatcagtcccactcaaaactctatgatgaagagagtctc
ctgtccctcactatgtcccaagatggattcccaaatgaagacggagaacaaatgacccct
gagcttctgctactgcaggaaagacaaagagcctctgagtggcccaaggatcgtgtcctg
ataaaccgtattgacctcgtctgccaggctgtactctcagggaagtggccttctagccgt
aggagccaggaaatgataacaggaggaattttggggccaggcaaccacttgctagacagt
ccctcattgactcctggagaatatggtgactctccagtccccacaccacgaagtagtagt
gcagcttccatggcagaggaggaagcatctgcagtcactacagcagcagcccagttcacc
aaacttcgccgaggcatggatgaaaaggagtttacagttcaaatcaaagatgaggaagga
ttgaagttaacattccagaagcacaagttgatggctaatggggtaatgggagatggacat
ccactgtttcataagaagaaggggaacagaaagaagctagtagagctggaggtggagtgc
gtggaagagcctaatcaccttgatgtggacctggagacccggatccctgtcatcaataag
gtggatggtactttgctggtgggtgaggatgcccctcgccgggctgaactggagatgtgg
ttacagggtcatccagagtttgctgtcgatccccgatttttagcgtatatggaagatcgc
agaaaacagaagtggcaaagatgtaaaaaaaataataaggcagaattgaactgtttggga
atggaaacagtacaaacagctaactctaggaatgggaaaaagggtcatcacactgaaaca
gtgttcaaccgggttttaccagggcctattgcaccagagagcagcaagaagcgggcccgt
agaatgcgaccagacctttctaagatgatggccctcatgcagggtggaagcactgggtct
ctatctctgcataacacgttccaacacagcagtagtggcctacagtctgtgtcatctttg
ggtcacagcagtgccacttctgcatctttgccttttatgccatttgtgatgggtggtgca
gcatcatcccctcatgtagactccagcaccatgcttcatcaccaccaccaccacccccac
ccccacccccaccatcaccaccatcaccatccaggcctgagagcccctggctacccctct
tcaccagcaactaccacctctggtactaccttgcggttgccatcactgcaacctgaggaa
gatgatgatgaggatgaaggtgatgatgatgatttatctcagggctatgatagctcagaa
agggacttctcactcattgatgatcctatgatgccagccaactcagactccagtgaagat
gctgatgactga
DBGET
integrated database retrieval system
