Callithrix jacchus (white-tufted-ear marmoset): 100406268
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Entry
100406268 CDS
T03264
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04150
mTOR signaling pathway
cjc04310
Wnt signaling pathway
cjc04928
Parathyroid hormone synthesis, secretion and action
cjc05010
Alzheimer disease
cjc05022
Pathways of neurodegeneration - multiple diseases
cjc05200
Pathways in cancer
cjc05224
Breast cancer
cjc05225
Hepatocellular carcinoma
cjc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100406268 (LRP5)
04150 mTOR signaling pathway
100406268 (LRP5)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
100406268 (LRP5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100406268 (LRP5)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100406268 (LRP5)
05226 Gastric cancer
100406268 (LRP5)
05224 Breast cancer
100406268 (LRP5)
09164 Neurodegenerative disease
05010 Alzheimer disease
100406268 (LRP5)
05022 Pathways of neurodegeneration - multiple diseases
100406268 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100406268 (LRP5)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100406268 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
Insulin_TMD
EGF
cEGF
Gp3-like
Motif
Other DBs
NCBI-GeneID:
100406268
NCBI-ProteinID:
XP_009006861
Ensembl:
ENSCJAG00000015736
UniProt:
U3D8R2
LinkDB
All DBs
Position
11:121933034..122070484
Genome browser
AA seq
1611 aa
AA seq
DB search
MEAAPPRPPWPLLLLLVLGGCSAPAAASPLLLFANRRDVRLVDAGRVKLETTVVVSGLED
AAAVDFQFSKGVVYWTDVSEEAIKQTYLNHTGVAVQNVVISGLVSPDGLACDWVGKKLYW
TDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALNPAHGYMYWTDWGEMPRIERAGMDGT
TRNIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALT
LSGDTLYWTDWQTRSIHACNKRTGGKRKEILSALYSPMDIQVLSQERQPFFHTRCEEDNG
GCSHLCLLSPVEPFYKCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTPDFTD
IVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLINTDINDPDGIAVD
WVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGENPKI
ECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDK
LPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDIIIDQLPDLMGLKAVNVAKIMGTNP
CADENGGCSHLCFFTPRSTRCGCPIGLELLSDMKTCIVPEAFLVFTSRAAIHRISLETNN
NDVAIPLTGVKEASALDFDVANNHIYWTDVSLKTISRAFLNGSSVEHVVEFGLDYPEGMA
VDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTEGYIYWTEWGGKP
RIVRAFMDGTNCMTLVDKVGRANDLTIDYTDRRLYWTDLDTNMIESSNMLGQERVVIADD
LPHPFGLTQYSDYIYWTDWNLHSIERADKTSGQNRTLIQGHLDFVMDILVFHSSRQDGLN
DCVHDNGQCGQLCLAIPGGHRCGCASHYTLDPSGRNCSPPTTFLLFSQKSAISRMIPDDQ
HSPDLVLPLHGLRNVKAIDYDPLDKFIYWVDGRQNIKRAKDDGTQPFVLTSLSQAQNPDR
QPHDLSIDIYSRTLFWTCEATNTINVHRLSGEAIGVVLRGDRDKPRAIVVNAERGYLYFT
NMQDRAAKIERAALDGTEREVLFTTGLIRPVALVVDNALGKLFWADADLKRIESCDLSGA
NRLTLEDANIVQPLGLTVLGKHLYWIDRQQQMIERVEKTTGDKRTRIQGRVTHLTGIHAV
EDVSLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQF
ACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQFPCARGQCVDLRLRCDGEADCQ
DRSDEADCDAICLPNQFRCASGQCVLIKQQCDSFPDCIDGSDELMCEINKPPSDDTGAHS
SAIGPVIGIILSLFVMGGIYFVCQRVVCQRYAGANGPFPHEYVSGTPHVPLNFIAPGGSQ
HGPFTGIACGKSMMSSVSLMGGRGGVPLYDRNHVTGASSSSSSSTKATLYPPILNPPPSP
ATDPSLYNMDMFYSSNIPATTRPYRPYIIRGMAPPTTPCSTDVCDSDYSASRWKASKYYL
DLNSDSDPYPPPPTPHSQYLSAEDSCPPSPATERSYFHLFPPPPSPCTDSS
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcgccgccccggccgccgtggccgttgctgctgctgctggtgctgggtggc
tgctcggcccccgccgcggcctcgccactcctgctgtttgcaaaccgccgggatgtacgg
ctggtggacgccggcagagtcaagctggagaccaccgtcgtggttagcggcctggaggat
gcggccgctgtggacttccagttctccaagggagtcgtgtactggacagacgtgagtgag
gaggccatcaagcagacctacctgaaccacacgggcgtcgccgtccagaacgtggtcatc
tctggcctggtctcgcccgacggcctggcctgcgactgggtgggcaagaagctgtactgg
acggactcagagaccaaccgcatcgaggtggccaacctcaatggcacgtctcggaaggtc
ctcttctggcaggaccttgaccagccgagggccatcgccttgaaccccgctcacgggtac
atgtactggacagattggggtgagatgccccggatcgagcgggcggggatggacggcacc
acccggaatatcattgtggactcggacatttactggcccaatgggctgaccatcgacctg
gaggagcagaagctctactgggctgacgccaagctcagcttcatccaccgcgccaacctg
gatggctcgttccggcagaaggtggtggagggcagcctgacgcaccccttcgccctgacg
ctctcgggggacactctgtactggacagactggcagacccgctccatccatgcctgcaac
aagcgcactgggggtaagaggaaggagatcctgagcgccctctactcacccatggacatc
caggtgctgagccaggagcggcagcctttcttccacactcgctgcgaggaggacaatggt
ggctgctcccacctgtgcctgctgtccccggtggagcctttctacaagtgtgcctgcccc
acgggcgtgcagctgcaggacaatggcaggacgtgtaaggcaggagccgaggaggtgctg
ctgctggcccggcggacagacctgcggaggatctcactggacacgccggacttcaccgac
atcgtgctgcaggtggatgacatccggcacgccattgccatcgactatgacccgctggag
ggctacgtctactggacggatgacgaggtgcgggccatccgcagggcgtacctggatggg
tcgggggcgcagacgctgatcaacaccgacatcaacgaccccgacggcatcgcagtcgac
tgggtggcccgaaacctctactggaccgacacgggcactgaccgcatcgaggtgacacgc
ctcaacggcacctcccgcaagatcctggtgtcggaggacctggacgagccccgcgccatc
gcgctgcaccccgtgatgggcctcatgtactggacagactggggagagaaccctaaaatc
gagtgtgccaacctggacgggcaggagcggcgtgtgctggtcaatgcctcccttgggtgg
cccaacggcctggccctggacctgcaggaggggaagctctactggggagacgccaagacg
gacaagatcgaggtgatcaatgtcgatgggacgaagaggcggaccctgctggaggacaag
ctcccgcacatttttgggttcacgctgctgggagacttcatctactggactgactggcag
cgccgcagcattgagcgggtgcacaaggtcaaggccagccgggacattatcattgaccag
ctgcccgacctgatggggctcaaagccgtgaatgtggccaagatcatgggaaccaacccg
tgcgctgatgagaacggcgggtgcagtcacctgtgcttcttcacgccccgctccacccgg
tgtggctgccccatcggcctggagctgctgagcgacatgaagacctgcatcgtgcccgag
gccttcttggtcttcaccagcagagccgccatccacaggatctccctcgagaccaacaac
aacgacgtggccatcccgctcacgggcgtcaaggaggcctcagccctggactttgacgtg
gccaacaaccacatctactggacggacgtcagcctgaagaccatcagccgtgccttcctg
aacgggagctccgtggagcacgtggtagagtttggccttgactaccccgagggcatggcc
gttgactggatgggcaagaacctctattgggctgacaccgggaccaacaggatcgaagtg
gcgcggctggacgggcagttccggcaagtcctcgtgtggagggacctggacaacccgagg
tcactggccctggatcccaccgagggctacatctactggactgagtggggcggcaagccg
aggattgtgcgggccttcatggacgggaccaactgcatgacgttggtggacaaggtgggc
cgggccaacgacctcaccattgactacactgaccgtcgcctctactggaccgacctggac
accaacatgattgagtcgtccaacatgctgggtcaggagcgggtcgtgattgccgacgac
ctgccgcacccgttcggtctgacgcagtacagcgattatatctactggacggactggaat
ctgcacagcatcgagcgggccgacaagaccagcggccagaaccgcaccctcatccagggc
cacctggacttcgtgatggacatcctggtgttccactcctcccgccaggatggcctcaac
gactgcgtgcacgacaacgggcagtgcgggcagctgtgccttgccatccccggcggccac
cgctgcggctgcgcctcacactacaccctggaccccagcggccgcaactgcagcccaccc
accaccttcttgctgttcagccagaaatctgccatcagccggatgatcccggacgaccag
cacagcccggacctcgtcctgcccctgcacgggctgaggaacgtcaaggccatcgactat
gacccactggacaagttcatctactgggtggacgggcgccagaacatcaagcgagccaag
gacgacgggacccagccctttgttttgacctctctgagccaagcccaaaacccagacagg
cagccccacgacctcagcatcgacatctacagccggacgctgttctggacatgtgaggcc
accaacaccatcaacgtccacaggctgagcggggaagccattggggtggtgctgcgtgga
gaccgcgacaagcccagggccatcgtcgtcaacgcagagcgagggtacctgtacttcacc
aacatgcaggaccgggcagccaagatcgagcgtgcggccctggacggcactgagcgggag
gtcctcttcaccaccggtctcatccgccccgtggccctggtggtagacaatgcactgggc
aagctgttctgggcggatgcagacctgaagcgcattgagagctgcgatctctcaggggcc
aaccgcctgaccctggaggacgccaacatcgtgcagcctctgggcctgactgtgcttggc
aagcacctctactggatcgaccgccagcagcagatgattgagcgtgtggagaagaccacc
ggggacaagcggactcgcatccagggccgcgtcacccacctcacgggcatccacgcggtg
gaggacgtcagcctggaggagttctcagcccacccatgtgcccgtgacaatggtggctgc
tcccacatctgtattgccaagggtgatgggacaccacggtgctcatgcccagtccacctc
gttctcctgcagaacctgctgacctgtggagagccgcccacctgctcccctgaccagttt
gcgtgtgccaccggggagatcgactgtatccccggggcctggcgctgcgacggctttcct
gagtgtgacgaccagagtgacgaggagggctgccccgtgtgctccgctgcccagttcccc
tgcgcccggggccagtgtgtggacctgcgcctgcgctgcgatggcgaggctgactgtcag
gatcgctcagacgaggccgactgtgacgccatctgcctgcccaaccagttccggtgtgcc
agcggccagtgcgtcctcatcaagcagcagtgtgactccttccccgactgcattgacggc
tccgatgagctcatgtgtgaaatcaacaagccgccctcagatgacactggagcccacagc
agcgccatcgggcctgtcatcggcatcatcctctccctctttgtcatgggtggcatctac
tttgtgtgccagcgcgtggtgtgccagcgctatgcgggggccaatgggcccttcccgcac
gagtatgtcagcggcacaccgcacgtgcctctcaatttcatagccccgggtggttcccag
catggtccctttacaggcatcgcatgtggaaagtccatgatgagctctgtgagcctgatg
gggggccggggcggggtgcccctctacgaccggaaccacgtcacaggggcctcatccagc
agctcatccagcacgaaggccacgctgtacccgccgatcctgaacccaccaccctccccg
gccacggacccctcgctgtacaacatggacatgttctactcttcaaacattccggccacc
acgagaccgtacaggccttacatcattcgaggaatggcacccccgacgacaccctgcagc
accgacgtgtgtgacagcgactacagtgccagccgctggaaggccagcaagtactacctg
gatttgaactcagactcagacccctacccgcccccacccacgccccacagccagtacctg
tcggcagaggacagctgcccgccctcgcccgccacagagaggagctacttccacctcttc
ccgccccctccatccccctgcacggactcgtcctga
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integrated database retrieval system
