Callithrix jacchus (white-tufted-ear marmoset): 100406361
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Entry
100406361 CDS
T03264
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X28
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04613
Neutrophil extracellular trap formation
cjc05034
Alcoholism
cjc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100406361 (HDAC9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100406361 (HDAC9)
09165 Substance dependence
05034 Alcoholism
100406361 (HDAC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100406361 (HDAC9)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100406361 (HDAC9)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100406361 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
100406361
NCBI-ProteinID:
XP_009000555
Ensembl:
ENSCJAG00000001076
LinkDB
All DBs
Position
8:complement(36715695..37674958)
Genome browser
AA seq
549 aa
AA seq
DB search
MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDSKDDFPLRKTESSVSSSSPGSGPSSPNNG
PTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQL
NASNSLKEKQKCDTQTLRQGVALPGQYGGSISASSSHPHVTLEGKPPNSSHQALLQHLLL
KEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQ
LVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAP
SSGNSTRSDSSACVDDTVGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLA
PGFVIKVII
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtatgatcagctcagtggatgtgaagtcagaagttcctgtgggcctggagccc
atttcacctttagacctaaggacagacctcaggatgatgatgcctgtggtggaccctgtt
gtccgtgagaagcaattgcagcaggaattacttctcatccagcagcagcaacaaatccag
aagcagctcctgatagcagagtttcagaaacagcatgagaacttgacacggcaacaccag
gctcagcttcaggaacatatcaagttgcaacaggaacttctagccataaaacagcaacaa
gaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagagagg
catcggagagaacagcagcttcctcctctcagaggcaaagatagaggacgagaaagggca
gtggcaagtacagaagtaaagcagaagcttcaagaattcctattgagtaaatcagcaaca
aaagacactccaactaatggaaaaaatcattccgtgagccgccatcccaagctctggtac
acggctgcccaccacacatcactggatcaaagctctccaccccttagtggaacatctcca
tcctacaagtacacattaccaggagcacaagattcaaaggatgatttccctcttcgaaaa
actgaatcctcagtcagtagcagttctccaggctctggtcccagttcaccaaacaatggg
ccgactggaagtgttactgaaaatgagacttcagttttgccccctacccctcatgctgag
caaatggtttcacagcaacgcattttaattcatgaagattccatgaacctgctaagtctt
tatacctctccttctttgcccaacattaccttggggcttcctgcagtgccatcccagctc
aatgcttcgaattcactcaaagaaaagcagaagtgtgacacacagacgcttaggcaaggt
gttgctctgcctgggcagtatgggggcagcatctcagcatcttccagccaccctcacgtc
actttagagggaaagccacccaacagcagccaccaggctctcctgcagcatttattattg
aaagaacaaatgcgacagcaaaagcttcttgtggctggtggagttcccttacatcctcag
tctcccttggcaactaaagagagaatttcacctggcattagaggtacacacaaattgccc
cgtcacagacctctgaaccgaacccagtctgcacctttgcctcagagtacattggctcag
cttgtcattcaacagcaacaccagcaattcttggagaagcagaagcaataccagcaacag
atccacatgaacaaactgctttcgaaatctattgaacaactgaagcaaccaggcagtcac
cttgaggaagcagaggaagagcttcagggggaccaagcgatgcaggaagacagagcgccc
tctagtggcaacagcactaggagcgacagcagtgcttgtgtggatgacacagtgggacaa
gttggggctgtgaaggtcaaggaggaaccagtggacagtgatgaagatgctcagatccag
gaaatggaatctggggagcaggctgcttttatgcaacaggtaataggcaaagatttagct
ccaggatttgtaattaaagtcattatctga
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integrated database retrieval system
