KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100406442
Entry
100406442         CDS       T03264                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100406442 (KDM4B)
Enzymes [BR:cjc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100406442 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100406442 (KDM4B)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100406442 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor SLX1_C DUF7141
Other DBs
NCBI-GeneID: 100406442
NCBI-ProteinID: XP_054105372
Ensembl: ENSCJAG00000017363
LinkDB
Position
22:4329012..4511715
AA seq 1240 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKPGGQSKIPSPEQN
ELKSLCCSSERFAVPEAACCVTLTALPQRGRGSAGALYTLPEAERLGSASQQGSQTAYHP
PEGVEASADVRRHRRRGDPRPHPAGGDGPVGPLHTVQHPEEGHDGGRVPPPGQQREVRGA
GGRPDPAPRAHLLVEALGAEKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVS
PIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHT
EDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPII
LKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCR
KDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSASRASLKAKLL
RRQISLKESRHWRKTEEERKPSLERKKETKRPGLSSHRKRSQPKKPKPEDPKSPGEGAAG
ALLEEAGGSMKEEAGLEADPEEEEEEPQSLPHGREAEGAEEDGRGKLRPTKAKSERKKKS
FGPLPPQLPPPAHFPSEEVRWLPSPLEPPVLGLGPTAMEESPLPAPLNVVHPEVPSEELE
AKPRPIIPMLYVVPRAGKAAFNQEHVSCQQAFEHFAQKGPNWKEPASPMELTGPEDGGAS
SGTSRAESKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEASP
FSGEEDVSDPEALRPLLSLQSLQWKNRAASFQAERKFNAAAARTEPYCAICMLFYPYCQA
LQTEKEAPPASLGEGSSATPPSRSGQKTRPLIPEMCFTSGGENTEPLPANSYIGDDGTSP
LMACAKCCLQVHASCYGIRPELVNEGWTCSRCSAHAWTAECCLCNLRGGALQMTTDRRWI
HVICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCST
SFHVTCAHAAGVLMEPDDWPYVVSITCLKHKSGGHAVQFLRAVSLGQVVITKNRNGLYYR
CRVIGAATQTCYEVNFDDGSYSDNLYPESVTSRDCVRLGPPSEGELVELRWTDGNLYKAK
FISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGAPQEPAFLGEEAK
AAKRPRVGTPLATEDSGRSQDYVAFVESLLQAQGRPGAPF
NT seq 3723 nt   +upstreamnt  +downstreamnt
atggggtctgaggaccacggcgcccagaaccccagctgcaaaatcatgacgtttcgtcca
accatggaagaatttaaggacttcaacaaatacgtggcctacatagaatcgcagggggcc
caccgggcgggcctggccaagcctggaggacagagcaagatcccgtctccagaacaaaac
gaactgaaaagtctgtgctgctcttctgaacgctttgcggttcccgaagctgcctgctgt
gtgacgctcactgctcttcctcagcgaggccggggctcggcaggtgctctctacacactg
ccagaggctgagcgcctgggctccgcgagccagcagggcagccagacagcgtatcatccc
cccgaaggagtggaagcctcggcagacgtacgacgacatagacgacgtggtgatccccgc
ccccatccagcaggtggtgacgggccagtcgggcctcttcacacagtacaacatccagaa
gaaggccatgacggtgggcgagtaccgccgcctggccaacagcgagaagtacgcggggca
ggcgggcggccggaccctgctccccgagcacacctgctggtggaggccctgggggcagag
aaggccatgacggtgggcgagtaccgccgcctggccaacagcgagaagtactgtaccccg
cgacaccaggactttgatgaccttgaacgcaaatactggaagaacctcacctttgtctcc
ccgatctacggggccgacatcagcggctctttatacgatgacgacgtggcccagtggaac
atcggcagcctccgcaccatcctggacatggtggagcgcgagtgcggcaccatcatcgag
ggcgtgaacacgccctacctgtacttcggtatgtggaagaccaccttcgcctggcacacc
gaggacatggacctgtacagcatcaactacctgcacttcggggagcccaagtcctggtac
gccatcccgccagagcacggcaagcgcctggagcggctggccatcggattcttcccgggg
agctctcagggctgcgacgcctttctgcggcacaagatgaccctcatctcacccatcatc
ctgaagaagtacgggatccccttcagccggatcacgcaggaggccggggaattcatgatc
acatttccctatggctaccacgccggcttcaatcacgggttcaactgcgcagaatctacc
aacttcgccaccctgcggtggattgattacggcaaagtggccactcagtgcacgtgccgg
aaggacatggtgaagatctccatggacgtgttcgtgcgcattctccagcctgagcgctac
gagctgtggaagcagggcaaggacctcacggtgctggaccacacgcggcccacggcgctc
accagccccgaactgagctcctggagtgcatcccgggcctcgctcaaggccaagctcctc
cgcagacaaattagtctgaaagaaagcagacactggagaaagactgaggaggagaggaaa
ccaagtctagagaggaagaaagagaccaaaaggccggggctgtcgtctcaccggaaacgg
agccagcccaagaagcccaagcccgaagaccccaagtccccaggggagggtgcagctggg
gcgctcctggaggaggccgggggcagcatgaaggaggaggccgggttggaggccgacccc
gaggaggaagaggaggagccgcagtcactgccacacggccgggaggctgagggcgcagaa
gaggatgggaggggcaagcttcggccaaccaaggccaagagcgagcgaaagaagaagagc
ttcggcccgctgcccccacagctgcccccgcctgctcacttcccctcagaggaggtgcgg
tggctgccatccccactggagcctccggtgctgggcctgggccccacggccatggaggag
agccccctgccagcgcccctcaacgttgtgcaccctgaggtgcccagtgaggagctagag
gccaagcctcggcccatcatccccatgctgtatgtggtgcctcgggccggcaaggcggcc
ttcaaccaggagcacgtgtcctgccagcaggcctttgagcactttgcccagaagggcccg
aactggaaggagccggcttcccccatggagctgacagggcccgaggacggtggagccagc
agtgggaccagccgtgcagagagcaaggcccgggccggagaggggcaggcaccatccaca
ttttccaaactgaagatggagatcaagaagagccggcgccatcccttgggccggccgccc
acccggtccccgctgtcggtggtcaagcaggaggcctcgagtgacgaggaggcatcccct
ttctccggggaggaggacgtgagtgaccccgaggccttgaggcccctgctgtccctgcag
tccctgcagtggaagaacagggcagccagcttccaggccgagaggaagttcaatgcggca
gctgcgcgcacggagccctactgcgccatctgcatgctcttctacccctactgccaggcc
ctacagactgagaaagaggcgcccccagcctccctcggagagggctcctcggccacacct
ccctccagaagcggccagaagacgaggccactgatccccgaaatgtgcttcacctccggc
ggcgagaacacagagccgctgccggccaactcctacatcggcgacgatgggaccagcccc
ctaatggcctgcgccaagtgctgcctgcaggttcacgccagttgctatggcatccgtccc
gagctggtcaacgaaggctggacgtgttcccggtgctcggcccacgcctggactgcggag
tgctgcctgtgtaaccttcgaggaggtgcgctgcagatgaccaccgataggaggtggatc
cacgtgatctgcgccatcgccgtccccgaggcccgcttcctgaacgtgatcgagcgccac
ccggtggacatcagcgccatccccgagcagcggtggaagctgaaatgtgtgtactgccgg
aagcggatgaagaaggtgtcgggcgcctgcatccagtgctcctatgagcactgctccacg
tccttccacgtgacctgtgcccacgcagccggcgtgctcatggagccggacgactggccc
tatgtggtctccatcacctgcctcaagcacaagtcggggggccacgcggtccagttcctg
agggccgtgtccctaggccaggtggtcatcaccaagaaccgtaacgggctgtactaccgc
tgccgcgtcatcggggctgccacgcagacctgctacgaagtgaactttgatgacggctcc
tacagtgacaacctgtaccctgagagcgtcactagtagggactgtgtccggctgggaccc
ccttccgagggggagctggtggagctccggtggaccgatggcaacctctacaaggccaag
ttcatttcctccgtcaccagccacatctaccaggtggagtttgaggatgggtcccagctg
acggtgaagcgaggagacatcttcaccctggaggaggaactgcccaagagggtccgctct
cggctgtcactgagcacgggggcaccgcaggagcctgccttcttgggggaggaggccaag
gccgccaagcgcccacgtgtgggcaccccgctcgccacggaggactcagggcggagccag
gactacgtggccttcgtggaaagcctcctgcaggcgcagggccggcccggagcccccttc
tag

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