Callithrix jacchus (white-tufted-ear marmoset): 100406529
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Entry
100406529 CDS
T03264
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05016
Huntington disease
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100406529 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
100406529 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100406529 (IFT57)
Cilium and associated proteins [BR:
cjc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
100406529 (IFT57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
SpecificRecomb
MCPsignal
TPR_IF140_C
Ribonuc_L-PSP
DUF745
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
100406529
NCBI-ProteinID:
XP_008980774
Ensembl:
ENSCJAG00000004974
LinkDB
All DBs
Position
15:complement(93187536..93248006)
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AA seq
416 aa
AA seq
DB search
MTAAPAVVTTSGLEDGVPRSRGEGAGEVVLERGPGAAYHVFEVMEDLMEKLKLLRFEEEF
LRKSNLKAPSRLYFALPTNPGEQFYMFCTLAAWLINKAGRPFERPQECDDPNATISNILS
ELRSFGRTADFPPSKLKSGCGEPVCYVLDCLAEEALKYIGFTWKRPVYPVEDELEEESVA
EDDAELTLSKVDEEFVEEETDNEENFIDLNVLKAQRYHLDMNKTAKQEDILESTTDAAEW
SLEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEITRTLEK
IGSREKYINSQLENLVQEYRAAQAQLSEAKEQYQQGNRRVMEKTRLLSEVTEELEKVKQE
MEERGSSMTDGAPLVKIKQSLARLKQETVEMDIRIGIVEHTLLQSRLQEKSNMSRD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgccccggccgtcgtcacgacatcgggtttggaagatggggtgcctaggtcc
cgtggcgaaggtgccggggaagtggtcttggagcgggggcccggcgcggcctaccacgtg
ttcgaggtgatggaggacttgatggagaagctgaagctgctccgcttcgaggaggagttc
ctccggaagagcaacctgaaggccccatccagactctattttgcactgcctaccaaccct
ggtgaacagttctacatgttttgtactcttgctgcatggctgattaataaagcaggacgt
ccctttgaacggcctcaagaatgtgatgaccctaatgcaacaatatctaacatactttcc
gagcttaggtcatttgggagaactgcagattttcctccttcaaaattaaagtcaggttgt
ggagaacctgtatgctatgttcttgattgcttagctgaagaagcattgaaatatattggt
ttcacctggaaaaggccagtatacccagtagaagacgagttagaagaagaaagtgttgca
gaagatgatgcagaattaacactaagtaaagtggatgaagaatttgtggaagaagagaca
gataatgaagaaaactttattgatctcaatgttttgaaggcccagaggtatcacttggat
atgaacaagactgccaaacaagaagatattttggaatccacaacagatgctgcagagtgg
agcctagaagtggaacgtgtactaccgcaactgaaagtcacgattagaactgacaataag
gactggaggatccacgttgaccaaatgcaccagcacaaaagtggaattgaatctgcatta
aaggagaccaagggatttttggacaaactccataatgaaataactaggactttggaaaag
atcggcagccgagaaaagtacatcaacagtcagcttgagaatttggttcaagaatatcgt
gcagctcaagcccagctgagtgaggcaaaggagcaataccagcagggaaacagaagagta
atggaaaagaccagactcttgtcagaggttacggaagaattagaaaaggtaaaacaagaa
atggaagaaagaggcagcagcatgactgatggtgctcctttggtgaagattaaacagagc
ttagcaaggctgaagcaagaaactgtagagatggacattcgaattggtattgtggaacac
acgttactccagtcaaggctgcaagagaagtccaacatgagcagggactaa
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integrated database retrieval system
