Callithrix jacchus (white-tufted-ear marmoset): 100406582
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Entry
100406582 CDS
T03264
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X4
KO
K04646
clathrin heavy chain
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04142
Lysosome
cjc04144
Endocytosis
cjc04721
Synaptic vesicle cycle
cjc04961
Endocrine and other factor-regulated calcium reabsorption
cjc05016
Huntington disease
cjc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100406582 (CLTC)
04142 Lysosome
100406582 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100406582 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
100406582 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100406582 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
100406582 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100406582 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100406582 (CLTC)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100406582 (CLTC)
Exosome [BR:
cjc04147
]
Exosomal proteins
Proteins found in most exosomes
100406582 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
100406582
NCBI-ProteinID:
XP_002748215
Ensembl:
ENSCJAG00000001505
UniProt:
U3D6K0
LinkDB
All DBs
Position
5:90255363..90336396
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccctgactatggagtctgacaaattcatctgcatt
agagaaaaagtaggagagcaggcccaggtggtaatcattgatatgaacgacccaagtaat
ccaattcgaagaccaatttcagcagacagtgccatcatgaatccagctagcaaagtaatt
gcactgaaagctgggaaaactcttcagatttttaacattgaaatgaaaagtaaaatgaag
gctcatactatgactgatgatgtcaccttttggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcactggagtatggaaggagagtctcagccagtgaaa
atgttcgatcgccattctagccttgcagggtgccagattatcaattatcgtacagatgca
aaacaaaagtggttacttctaactggtatatctgcacagcaaaatcgtgtggtgggagct
atgcagctatattctgtagatcggaaagtatctcagcccattgaaggacatgcagctagc
tttgcacagtttaagatggaaggaaatgcagaagaatcaacgttattttgttttgcagtc
cggggccaagctggagggaagttacatattattgaagttggcacaccacctacggggaac
cagccctttccaaagaaggcagtggatgttttctttcctccggaagcacaaaatgatttt
cctgttgcaatgcagatcagtgaaaagcatgatgtggtattcttgataaccaaatatggt
tatatccacctctatgatcttgagactggtacctgcatctacatgaatagaatcagtgga
gaaacaatttttgttactgcacctcatgaagccacagctggaataattggtgtaaacaga
aagggacaggttttgtcagtgtgtgtggaagaagaaaacataattccttacatcaccaat
gttctacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactttttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtagctgctaatgcaccaaagggaattcttcgtactccagacactatccgtcgg
ttccagagtgttccagcccagccaggtcaaacttctcctctacttcagtattttggtatc
cttttggaccagggacagctcaacaaatatgaatccttagagctttgtaggcctgtactt
cagcaagggcgaaaacagcttttggagaaatggttaaaagaagataagctggaatgttct
gaagaactgggtgatcttgtgaaatctgtggaccctacattggcacttagtgtgtaccta
agggctaatgtcccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatacactccagattggatatttctgctgagaaat
gtaatgcgaatcagtccagatcagggacagcagtttgctcaaatgttagttcaagatgaa
gaacctcttgctgacatcacacagattgtagatgtctttatggaatacaatctaattcag
caatgtaccgcattcttgcttgatgcactgaagaataatcgcccatctgaaggtccttta
cagacgcggttacttgagatgaaccttatgcatgcgcctcaagttgcagatgctattcta
ggcaatcagatgttcacgcattatgaccgggctcatatcgctcagctgtgtgaaaaggct
ggcttactgcagcgtgcattagaacacttcactgatttatatgatataaaacgtgcagtg
gttcacacccatcttcttaaccctgagtggttagtgaattactttggttccttatcagta
gaagactctctagaatgtctcagagccatgctgtctgccaatattcgtcagaatctgcag
atctgtgttcaggtggcttctaaatatcatgaacaactgtcaactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcaa
atcaaagaagtagaaagaatctgtagagaaagcaactgctatgatcctgagcgagtcaag
aattttcttaaggaagcaaaactaacagatcagctaccacttatcattgtgtgtgatcga
tttgactttgtccatgatttggtgctttatttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagccgacttcctgtggttattggaggattactt
gatgttgactgttctgaagatgtcataaaaaacttgattctggttgtaagaggtcaattc
tccactgatgaacttgttgctgaagttgaaaaaagaaacagattgaaactacttctgcct
tggctagaggccagaattcatgagggctgtgaagagcctgctactcacaatgccttagcc
aaaatctacatagacagtaataacaacccggagagatttcttcgtgaaaatccctactat
gacagtcgcgttgttggaaagtattgtgagaagagagatccacatctggcctgcgttgct
tatgaacgtggtcagtgtgatctggaacttattaatgtttgcaatgagaattccctcttc
aaaagtctgtctcgctacctggtacgtcgaaaggatccagaattgtggggcagcgtgctg
ctggaaagcaatccttacaggagacccctaattgaccaggttgtacaaacagctttgtct
gagactcaagaccctgaagaagtgtcagtaactgtcaaggctttcatgactgcagacctt
cctaatgaactcattgaactgctggagaaaattgtcctcgataactctgtattcagtgaa
cacaggaatctgcaaaacctccttatcctcactgcaattaaggctgaccgtacacgtgtt
atggagtatattaatcgcttggataattatgatgccccagatattgccaatatcgccatc
agtaatgaactgtttgaagaagcatttgccattttccggaaattcgatgtcaatacttca
gcagttcaggtcttaattgaacatattggaaacttggatcgggcatatgagtttgctgaa
cgttgcaatgaacctgcggtctggagtcaacttgcaaaagcccagttgcagaaaggaatg
gtgaaagaagccattgattcttacatcaaagcagatgatccttcctcctacatggaagtt
gttcaggctgccaatactagtggaaactgggaagaactggtgaagtacctgcagatggcc
cgtaagaaggctcgagagtcctacgtggagacagaattgatatttgcgctggctaaaaca
aaccgccttgcagagttagaagaatttatcaatggaccaaataacgctcatatccaacaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagctgttgtacaataat
gtttccaattttggacgtttggcatctaccctcgttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgcttcgcctgt
gtagatgggaaagaattccgtcttgctcagatgtgcggacttcatattgttgtacatgca
gatgaattagaagaacttatcaactactatcaggatcgtggatattttgaagagctgatt
acgatgctggaagcagcactgggacttgagcgagctcacatgggaatgtttaccgaatta
gccattctgtactctaaatttaagcctcagaaaatgagagagcacctggagctgttctgg
tctagagtgaatattcccaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ctggtgtttttgtatgacaagtatgaagaatatgataatgccataattaccatgatgaat
catccaactgatgcctggaaagaagggcaattcaaagatatcattaccaaggttgccaat
gtggaactatactacagagcaatacagttctacttagaattcaagcctctgttgttaaat
gatttgctgatggtgctgtctccacggctggatcacactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttacgttcagttcagaaccataacaac
aaatctgtgaatgaatcactcaacaacctttttattacagaagaagattatcaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcgcttgctcagcgtttggaa
aaacatgaactcattgagttcaggagaattgctgcttacctcttcaaaggcaacaatcgc
tggaaacagagtgtagaactgtgcaagaaagacagcctttacaaggatgcaatgcagtat
gcttctgaatctaaagataccgagttagctgaagaactcctgcagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgcctgtttacctgttacgatcttttaaggccagat
gtcgtcctagaaactgcatggaggcacaatatcatggattttgccatgccctattttatc
caggtcatgaaggaatacttgacaaaggtggataaattagatgcttcagaatcactgaga
aaagaagaagaacaagctacagagacacaacccattgtttatggtcagccccagttgatg
ctgacagcaggacccagtgttgccgtccctccccaggcaccttttggttatggttatact
gcaccaccgtatggacagccacagcctggcttcgggtacagcatgtga
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integrated database retrieval system
