| Entry |
|
|---|
| Symbol |
NPHP4
|
|---|
| Name |
(RefSeq) nephrocystin-4 isoform X9
|
|---|
| KO |
|
|---|
| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:cjc03037]
100406722 (NPHP4)
Cilium and associated proteins [BR:cjc03037]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100406722 (NPHP4)
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
7:complement(40846173..40980568)
|
|---|
| AA seq |
1429 aa
MGRMNDWHRIFTQNVLVPPHPQRARQPVKESAAFQCVLKWLDGPIIRQGMLEALSEVECH
LRVSFFDVTYRHFFGRTWKTTVKPTKRPPSRIVFNEPLYFHTSLNHPHVVAVVEVVAEGK
KLDGTLYTSSCGFGILQIFSSQPESPTSAPQDKRLRLYHGTPRALLHPLLQDPAEQNKHM
TLIENCSLHYTLKPHPALEPVFHLLPENLLVSGLQQIPGLLPAHGESGDALRKPRLQKPI
TGHLDDLFFTLYPTLEKFEEELLELLVQDHFQEGCGLLDGGALEILERRLHVGVHNGLGF
VQRPQVVVLVPEMDVALTRSASFSRKVVSSSKTSSGSQALVLRSRLRLPEMVSHPAFAVV
FQLEYVFSSPAGVDGNAASVTSLSKLACMHMVRWAVWNPLLEADSGRVTLPLQGGIQPNP
SHCLVYKVPSASMSSEEVKQVESGTVRFQFSLGSEEHLDAPAEPVSSPKVERQLAGKPPT
SPSSPPAPAPRGLTALQDSPVGPGLSLSQLVASPQSRTRHCLARPTSQPPHGSQASPAQA
QEFPLEGGISHLEADLGQTSLVLETSIAEQLQELPFTPLHAPIVVGTETRSSAGQPSRAS
MVLLQSSGFPEILDANEQPAEAVNPSDPVTFNPQKEESDCLQSNEIVLQFLAFSRVAQDC
RGMPWPETVYFTFQFYRFPPAVTPRLQLVQLEEAGQPSSGALTHILVPVSRDGAFDAGPP
GFQLRYMVGPGFLKPGERRHFTRYLALQTLQIDVWDGDSLLLIGSAAVHMKHLLRQGRPA
VQASHELEVVATEYEQDTVVVSGDVLGFGRVKPIGVHSVVKGRLYLTLANVGHLCEQKVR
DASTLPPSRSRVISNDGSSRFPGGSLLTSGSSRRKRVVQAQKLAELDSELAAMLLTHAQG
GKGPQDIGREVDATRRRKLERMRSVRLKEAGGASGRRGTSVLAQQSVRTQHFRDLQVIAA
YRERTKAESIASLLSLSITTEHTLHATLGVAEFFEFVLKNPHNTQHTVTVEIDNPELSVI
VDSQEWRDLKGAAGLHTPVEEDMFHLRGNLAPQLYLRPHETAHVPFKFQSFSAGLLAVAQ
ASPGLSNEKGMDAMSPWKSGTVPTKHAKVLFRASDGKPIAVLCLTVELQPHMVDQVFRFY
HPELTFLKKAIRLPPWHTLPGAQVGMPGEDPPVHVRCSDPNIICETQHMGPGEPRDVFLK
VASGPSPEIKDFFVIIYSDRWLAVPTQTWQVYVHSLQRVDVSCVTGQLTRLSLVLRGMKT
VRKVRAFTSHPQELKTDPKGVFVLPPRGVQDLHVGVRPLRAGSRFIHLNLVDVDCHQLVA
SWLVCLSCRQPLISKAFEITLAAGEGKGVNKRITYTNPYPSQRTFHLHSDHPELLQFRED
SFQVAGGETYTIGLQFASSRRAGEEEILIYINDHEDKNEEAFCVKVIYQ |
|---|
| NT seq |
4290 nt +upstreamnt +downstreamnt
atgggcaggatgaacgactggcacaggattttcacccaaaacgtgcttgtccctccccac
ccacagagagcacgccagcctgtgaaggaatcagcagcgttccagtgtgtcctgaagtgg
ctggacggacccatcattaggcagggcatgctggaggcactgtcagaggttgaatgccat
ctgcgagtatctttctttgatgtcacttaccggcacttctttgggaggacgtggaaaacc
acagtgaagccgacaaagagaccgccgtccaggatcgtcttcaatgagcctttgtatttt
cacacatccttaaaccaccctcatgtcgtggctgtggttgaagtggtcgctgagggcaag
aaactggatgggaccctctacacgtcgtcctgtgggtttggaatccttcagatcttcagc
agccagccagaatctcctacttctgctccccaggacaaacggttgcggctgtaccatggc
acccccagagccctcctgcacccgcttctccaggaccccgcagagcaaaacaaacacatg
accctcattgagaactgcagcctgcactacacgctgaagccacacccggccctggagcct
gtgttccaccttcttcccgagaaccttctagtgtctggtctgcagcagatccctggcttg
cttccagctcatggagaatccggcgatgctctccgaaagcctcgcctccagaagcccatc
acgggtcacttggatgacttattcttcacattgtaccccaccctcgagaagtttgaggaa
gagctgctggagctcctcgtccaggaccacttccaggagggatgtggcctgctggacggt
ggtgccctggagatcctggaacggcgcctgcatgtgggcgtgcacaacggtctgggcttc
gtgcagaggccgcaggtggttgtgctggtacccgaaatggacgtggccttgacgcgctcc
gccagcttcagcaggaaagtggtctcttcttccaagaccagctctggaagccaagctctg
gttttgagaagccgcctccgcctcccggagatggtcagccaccctgcgtttgcagtcgtc
ttccagctggagtacgtgttcagcagccctgcaggagtggacggcaatgcagcctcggtc
acctctctgtccaagctggcgtgcatgcacatggtccgctgggctgtttggaaccccttg
ctggaagctgattctggaagggtgacgctgcctctgcagggtgggatccagcccaacccc
tcacactgtctggtctataaggtcccctcagccagcatgagctctgaagaggtgaagcag
gtggagtcgggtacagtccggttccagttctcgctgggctcagaagaacacctggacgca
cctgcagagcctgtcagcagccccaaggtagagcggcaacttgcggggaaaccacccacg
tccccttccagcccgccggcaccagcacctcgaggtctcactgccctacaggactcgcct
gtgggaccagggctgtcgctttcccagctggtggcctccccacagtcccggactcggcac
tgcttggccaggcccacttcccagccaccccatggctctcaggcctccccagcccaggca
caggagttcccgttggagggtggtatctcccacctggaagccgacctgggccagacctcc
ctggtcctcgaaacatccatcgctgaacagttacaggagctgccgttcacgcctttgcat
gcccctattgtcgtgggaactgagaccaggagctctgcagggcagccctcgagggcctcc
atggtgctcctgcagtcctctggctttcctgagattctggatgccaatgaacagccagcc
gaggcagtcaacccttcagaccctgtgacgtttaaccctcagaaggaggaatcggattgt
ctacaaagcaacgagatagtgctacagtttctcgcctttagcagagtggcccaggactgc
cgaggaatgccatggccagagactgtgtatttcaccttccagttctaccgcttcccgccc
gcagtgacgccacgactgcagctggtccagctggaagaggccgggcagcccagctctggc
gccctgacccacatccttgtgcctgtgagcagagacggcgcctttgatgctgggcctcct
ggcttccagctgaggtacatggtgggccctgggttcctgaagcctggcgagcggcgccac
ttcacccgctacctggccttgcagaccctgcagatcgatgtctgggacggagactccctg
ctgctcatcggctctgccgccgtccacatgaagcatctcctccgccaaggccggccggct
gtgcaagcctcccacgagcttgaggttgtggcgactgaatacgagcaggacaccgtggtg
gtgagtggagacgtgctggggtttggccgcgtcaagcccatcggtgtccactcagtggtg
aagggccggctgtacctgaccttggccaatgtgggtcacctatgtgaacagaaagtgaga
gatgctagcacattgccaccgtccaggtctcgggtcatctcaaacgatggatccagccgc
ttccctggaggcagcctcctcactagtggaagctcaaggcgaaagcgggtggtgcaagca
cagaagctggcggaattggacagtgaactggctgccatgctgctgacccatgcccagggt
ggcaaggggccccaggacatcggccgtgaggtggatgccacccgcaggcgcaagctggag
cggatgaggtctgtgcgtctgaaggaggccgggggagcatcgggccggcgtgggaccagc
gtgctggcccagcagagtgttcgcacacagcactttcgggacctacaggtcattgctgcc
taccgggaacgcacaaaggccgagagcatcgccagcctgctgagcctgtccatcaccacg
gagcacacacttcatgccacgctgggggtcgccgagttcttcgagtttgtgcttaagaac
ccccacaacacacagcacacagtgactgtggagatcgacaaccccgagctcagtgtcatc
gtggacagtcaggagtggagagacttgaagggtgctgctggcctgcacacaccagtggag
gaggacatgttccacctgcgtggcaacctggccccccagctctacctgcgcccccacgag
accgcccacgtccccttcaagttccagagcttctctgcggggctgctggctgtggcgcag
gcctctcctgggttgagcaacgagaagggcatggatgccatgtcaccttggaagtccggc
acagtgcccactaaacacgccaaggttttgttccgagcgagtgacggcaagcctatcgct
gtgctctgcctgaccgtggaactgcagccccacatggtggaccaggtcttccgcttctat
cacccagaactcaccttcctgaagaaggctatccgcctgccgccctggcacacgcttcca
ggtgctcaggtggggatgcctggtgaggaccccccagtccacgttcgctgcagcgaccca
aacatcatctgtgagacccagcacatgggccctggggagccacgggacgtgtttctgaag
gtagctagtggtccaagcccagagatcaaagacttctttgtcatcatttactcggatcgc
tggctggcggtgcccacacagacgtggcaggtgtacgtccactctctgcagcgtgtggat
gtttcctgcgtcacaggccagctgacccgcctgtcccttgtccttcgggggatgaagaca
gtgaggaaagtgagagctttcacctcgcacccccaggagctgaagacggaccccaaaggt
gtctttgtgctgccgcctcggggggtgcaggacctgcatgttggcgtgaggcccctcagg
gctggcagccgcttcatccaccttaacctggtagatgtggattgccaccagctggtggcg
tcctggctcgtgtgcctctcctgccgccagccgctcatctccaaggcctttgagatcaca
ttggctgcgggtgaagggaagggcgtcaacaagaggatcacctacaccaacccctacccc
tcccagaggacattccacctgcacagcgaccacccggagctactgcagttcagggaggac
tccttccaggttgcgggtggagagacctacaccatcggcctgcagtttgcgtctagtcgg
agagctggggaggaggagatcctgatctacatcaacgaccatgaggacaaaaacgaagag
gcgttttgcgtgaaggtcatctaccagtga |
|---|
