Callithrix jacchus (white-tufted-ear marmoset): 100406722
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Entry
100406722 CDS
T03264
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X9
KO
K16478
nephrocystin-4
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100406722 (NPHP4)
Cilium and associated proteins [BR:
cjc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100406722 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
Ig_NPHP4_1st
NPHP4_C2_2nd
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
100406722
NCBI-ProteinID:
XP_008998572
Ensembl:
ENSCJAG00000000076
UniProt:
A0A8I3VY19
LinkDB
All DBs
Position
7
Genome browser
AA seq
1429 aa
AA seq
DB search
MGRMNDWHRIFTQNVLVPPHPQRARQPVKESAAFQCVLKWLDGPIIRQGMLEALSEVECH
LRVSFFDVTYRHFFGRTWKTTVKPTKRPPSRIVFNEPLYFHTSLNHPHVVAVVEVVAEGK
KLDGTLYTSSCGFGILQIFSSQPESPTSAPQDKRLRLYHGTPRALLHPLLQDPAEQNKHM
TLIENCSLHYTLKPHPALEPVFHLLPENLLVSGLQQIPGLLPAHGESGDALRKPRLQKPI
TGHLDDLFFTLYPTLEKFEEELLELLVQDHFQEGCGLLDGGALEILERRLHVGVHNGLGF
VQRPQVVVLVPEMDVALTRSASFSRKVVSSSKTSSGSQALVLRSRLRLPEMVSHPAFAVV
FQLEYVFSSPAGVDGNAASVTSLSKLACMHMVRWAVWNPLLEADSGRVTLPLQGGIQPNP
SHCLVYKVPSASMSSEEVKQVESGTVRFQFSLGSEEHLDAPAEPVSSPKVERQLAGKPPT
SPSSPPAPAPRGLTALQDSPVGPGLSLSQLVASPQSRTRHCLARPTSQPPHGSQASPAQA
QEFPLEGGISHLEADLGQTSLVLETSIAEQLQELPFTPLHAPIVVGTETRSSAGQPSRAS
MVLLQSSGFPEILDANEQPAEAVNPSDPVTFNPQKEESDCLQSNEIVLQFLAFSRVAQDC
RGMPWPETVYFTFQFYRFPPAVTPRLQLVQLEEAGQPSSGALTHILVPVSRDGAFDAGPP
GFQLRYMVGPGFLKPGERRHFTRYLALQTLQIDVWDGDSLLLIGSAAVHMKHLLRQGRPA
VQASHELEVVATEYEQDTVVVSGDVLGFGRVKPIGVHSVVKGRLYLTLANVGHLCEQKVR
DASTLPPSRSRVISNDGSSRFPGGSLLTSGSSRRKRVVQAQKLAELDSELAAMLLTHAQG
GKGPQDIGREVDATRRRKLERMRSVRLKEAGGASGRRGTSVLAQQSVRTQHFRDLQVIAA
YRERTKAESIASLLSLSITTEHTLHATLGVAEFFEFVLKNPHNTQHTVTVEIDNPELSVI
VDSQEWRDLKGAAGLHTPVEEDMFHLRGNLAPQLYLRPHETAHVPFKFQSFSAGLLAVAQ
ASPGLSNEKGMDAMSPWKSGTVPTKHAKVLFRASDGKPIAVLCLTVELQPHMVDQVFRFY
HPELTFLKKAIRLPPWHTLPGAQVGMPGEDPPVHVRCSDPNIICETQHMGPGEPRDVFLK
VASGPSPEIKDFFVIIYSDRWLAVPTQTWQVYVHSLQRVDVSCVTGQLTRLSLVLRGMKT
VRKVRAFTSHPQELKTDPKGVFVLPPRGVQDLHVGVRPLRAGSRFIHLNLVDVDCHQLVA
SWLVCLSCRQPLISKAFEITLAAGEGKGVNKRITYTNPYPSQRTFHLHSDHPELLQFRED
SFQVAGGETYTIGLQFASSRRAGEEEILIYINDHEDKNEEAFCVKVIYQ
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggatgaacgactggcacaggattttcacccaaaacgtgcttgtccctccccac
ccacagagagcacgccagcctgtgaaggaatcagcagcgttccagtgtgtcctgaagtgg
ctggacggacccatcattaggcagggcatgctggaggcactgtcagaggttgaatgccat
ctgcgagtatctttctttgatgtcacttaccggcacttctttgggaggacgtggaaaacc
acagtgaagccgacaaagagaccgccgtccaggatcgtcttcaatgagcctttgtatttt
cacacatccttaaaccaccctcatgtcgtggctgtggttgaagtggtcgctgagggcaag
aaactggatgggaccctctacacgtcgtcctgtgggtttggaatccttcagatcttcagc
agccagccagaatctcctacttctgctccccaggacaaacggttgcggctgtaccatggc
acccccagagccctcctgcacccgcttctccaggaccccgcagagcaaaacaaacacatg
accctcattgagaactgcagcctgcactacacgctgaagccacacccggccctggagcct
gtgttccaccttcttcccgagaaccttctagtgtctggtctgcagcagatccctggcttg
cttccagctcatggagaatccggcgatgctctccgaaagcctcgcctccagaagcccatc
acgggtcacttggatgacttattcttcacattgtaccccaccctcgagaagtttgaggaa
gagctgctggagctcctcgtccaggaccacttccaggagggatgtggcctgctggacggt
ggtgccctggagatcctggaacggcgcctgcatgtgggcgtgcacaacggtctgggcttc
gtgcagaggccgcaggtggttgtgctggtacccgaaatggacgtggccttgacgcgctcc
gccagcttcagcaggaaagtggtctcttcttccaagaccagctctggaagccaagctctg
gttttgagaagccgcctccgcctcccggagatggtcagccaccctgcgtttgcagtcgtc
ttccagctggagtacgtgttcagcagccctgcaggagtggacggcaatgcagcctcggtc
acctctctgtccaagctggcgtgcatgcacatggtccgctgggctgtttggaaccccttg
ctggaagctgattctggaagggtgacgctgcctctgcagggtgggatccagcccaacccc
tcacactgtctggtctataaggtcccctcagccagcatgagctctgaagaggtgaagcag
gtggagtcgggtacagtccggttccagttctcgctgggctcagaagaacacctggacgca
cctgcagagcctgtcagcagccccaaggtagagcggcaacttgcggggaaaccacccacg
tccccttccagcccgccggcaccagcacctcgaggtctcactgccctacaggactcgcct
gtgggaccagggctgtcgctttcccagctggtggcctccccacagtcccggactcggcac
tgcttggccaggcccacttcccagccaccccatggctctcaggcctccccagcccaggca
caggagttcccgttggagggtggtatctcccacctggaagccgacctgggccagacctcc
ctggtcctcgaaacatccatcgctgaacagttacaggagctgccgttcacgcctttgcat
gcccctattgtcgtgggaactgagaccaggagctctgcagggcagccctcgagggcctcc
atggtgctcctgcagtcctctggctttcctgagattctggatgccaatgaacagccagcc
gaggcagtcaacccttcagaccctgtgacgtttaaccctcagaaggaggaatcggattgt
ctacaaagcaacgagatagtgctacagtttctcgcctttagcagagtggcccaggactgc
cgaggaatgccatggccagagactgtgtatttcaccttccagttctaccgcttcccgccc
gcagtgacgccacgactgcagctggtccagctggaagaggccgggcagcccagctctggc
gccctgacccacatccttgtgcctgtgagcagagacggcgcctttgatgctgggcctcct
ggcttccagctgaggtacatggtgggccctgggttcctgaagcctggcgagcggcgccac
ttcacccgctacctggccttgcagaccctgcagatcgatgtctgggacggagactccctg
ctgctcatcggctctgccgccgtccacatgaagcatctcctccgccaaggccggccggct
gtgcaagcctcccacgagcttgaggttgtggcgactgaatacgagcaggacaccgtggtg
gtgagtggagacgtgctggggtttggccgcgtcaagcccatcggtgtccactcagtggtg
aagggccggctgtacctgaccttggccaatgtgggtcacctatgtgaacagaaagtgaga
gatgctagcacattgccaccgtccaggtctcgggtcatctcaaacgatggatccagccgc
ttccctggaggcagcctcctcactagtggaagctcaaggcgaaagcgggtggtgcaagca
cagaagctggcggaattggacagtgaactggctgccatgctgctgacccatgcccagggt
ggcaaggggccccaggacatcggccgtgaggtggatgccacccgcaggcgcaagctggag
cggatgaggtctgtgcgtctgaaggaggccgggggagcatcgggccggcgtgggaccagc
gtgctggcccagcagagtgttcgcacacagcactttcgggacctacaggtcattgctgcc
taccgggaacgcacaaaggccgagagcatcgccagcctgctgagcctgtccatcaccacg
gagcacacacttcatgccacgctgggggtcgccgagttcttcgagtttgtgcttaagaac
ccccacaacacacagcacacagtgactgtggagatcgacaaccccgagctcagtgtcatc
gtggacagtcaggagtggagagacttgaagggtgctgctggcctgcacacaccagtggag
gaggacatgttccacctgcgtggcaacctggccccccagctctacctgcgcccccacgag
accgcccacgtccccttcaagttccagagcttctctgcggggctgctggctgtggcgcag
gcctctcctgggttgagcaacgagaagggcatggatgccatgtcaccttggaagtccggc
acagtgcccactaaacacgccaaggttttgttccgagcgagtgacggcaagcctatcgct
gtgctctgcctgaccgtggaactgcagccccacatggtggaccaggtcttccgcttctat
cacccagaactcaccttcctgaagaaggctatccgcctgccgccctggcacacgcttcca
ggtgctcaggtggggatgcctggtgaggaccccccagtccacgttcgctgcagcgaccca
aacatcatctgtgagacccagcacatgggccctggggagccacgggacgtgtttctgaag
gtagctagtggtccaagcccagagatcaaagacttctttgtcatcatttactcggatcgc
tggctggcggtgcccacacagacgtggcaggtgtacgtccactctctgcagcgtgtggat
gtttcctgcgtcacaggccagctgacccgcctgtcccttgtccttcgggggatgaagaca
gtgaggaaagtgagagctttcacctcgcacccccaggagctgaagacggaccccaaaggt
gtctttgtgctgccgcctcggggggtgcaggacctgcatgttggcgtgaggcccctcagg
gctggcagccgcttcatccaccttaacctggtagatgtggattgccaccagctggtggcg
tcctggctcgtgtgcctctcctgccgccagccgctcatctccaaggcctttgagatcaca
ttggctgcgggtgaagggaagggcgtcaacaagaggatcacctacaccaacccctacccc
tcccagaggacattccacctgcacagcgaccacccggagctactgcagttcagggaggac
tccttccaggttgcgggtggagagacctacaccatcggcctgcagtttgcgtctagtcgg
agagctggggaggaggagatcctgatctacatcaacgaccatgaggacaaaaacgaagag
gcgttttgcgtgaaggtcatctaccagtga
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integrated database retrieval system
