Callithrix jacchus (white-tufted-ear marmoset): 100406821
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Entry
100406821 CDS
T03264
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X3
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100406821 (DDX52)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100406821 (DDX52)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
90S particles
Helicases
100406821 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
100406821
NCBI-ProteinID:
XP_002748362
Ensembl:
ENSCJAG00000015190
LinkDB
All DBs
Position
5:complement(93918579..93947524)
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AA seq
575 aa
AA seq
DB search
MDAHDLFRRLCAGAKFDVRRFSADAARFQIGKRKYDFNSLEMLQELDFFGNKKSVPGVCG
TSQAHQKPQNEEVKKESLTERKREQSKKKRKTMTSEITSQDEVATIQWMSSVEAKIEDKK
VQRENKLTSGKLERLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNI
LDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFGIPILMQLKQTANKGFRALII
SPTRELASQIHRELVKISEGTGFRIHMIHKAVVAAKKFGPKSSKKFDILVTTPNRLIYLL
KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDV
EQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQ
SIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKG
VNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSKQKKKMIKKPLERE
SISTTPKCFLEKAKDKRKKVTGQNSKKKVALEDKN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccacgatctctttcggcggctttgcgcgggggccaaattcgacgtgagacgc
ttctcggcagacgcagcccgattccagataggaaaaaggaaatatgacttcaactctttg
gagatgctgcaggaactggacttttttggaaacaagaagtctgtcccaggtgtgtgtgga
acatcacaagcacatcagaagccccaaaatgaagaggtaaaaaaagagagcctaactgaa
aggaagagggagcaaagcaagaaaaaaaggaagacgatgacttcagaaattacttcccaa
gacgaagttgctactatacagtggatgtcatctgtagaagcaaagattgaagacaaaaaa
gttcaaagagaaaataaactaacttcaggaaagttggagcgtctcagaaaggaaaagata
aacttcttgcggaataaacacaaaattcacgtccaaggaaccgatcttcctgacccaatt
gctacatttcagcaacttgatcaggaatataaaatcaattctcgactacttcagaacatt
ctggatgcaggtttccaaatgcctacaccaatccaaatgcaagccatcccagttatgctg
catggtcgggaacttctggcttctgctccaactggatctggaaaaacactagcttttggc
attcctattttaatgcagctgaaacagacagcaaataaaggcttcagagccctgattata
tcaccaacacgagaacttgccagccagattcatagagagttagtaaaaatttctgaggga
acaggattcaggatacacatgatccacaaagcagtagtggcagccaagaaatttggacct
aaatcatctaagaagtttgatattcttgtgactactccaaatcgactaatctatttatta
aagcaagatcccccaggaattgacctaacaagtgttgagtggcttgtagtagatgaatca
gataaactgtttgaagatggcaaaactggattcagagaccagctggcttccatcttcctg
gcctgcacatcccataaggtcagaagagctatgttcagtgcaacttttgcatatgatgtt
gaacagtggtgcaaactcaacctggacaatgtcatcagtgtgtccattggagcaaggaat
tctgcagtagaaactgtagaacaagagcttctttttgttggatctgagactggaaaactt
ctggccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcag
tccattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtggat
gttattcatgcagagagaacacagcaacagagagataacactgtccacagtttcagagca
ggaaaaatctgggttctgatttgtacagccttgctcgcaagagggattgattttaaaggt
gtgaacctggtgatcaactatgactttccgaccagctcagtggaatatatccacaggata
ggtcgaactggaagagcagggaataagggaaaagcaattacatttttcactgaagatgat
aaaccattattaagaagcaaacaaaagaaaaagatgattaagaaaccattggaaagggag
agcattagtacaactccaaaatgtttcttagaaaaagctaaggataaacggaaaaaggtc
actggtcagaacagcaagaagaaagtagctcttgaagacaaaaattaa
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