Callithrix jacchus (white-tufted-ear marmoset): 100406828
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Entry
100406828 CDS
T03264
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
cjc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100406828 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100406828 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100406828 (L1CAM)
04090 CD molecules [BR:
cjc04090
]
100406828 (L1CAM)
04091 Lectins [BR:
cjc04091
]
100406828 (L1CAM)
Cell adhesion molecules [BR:
cjc04515
]
Immunoglobulin superfamily
L1 family
100406828 (L1CAM)
CD molecules [BR:
cjc04090
]
Proteins
100406828 (L1CAM)
Lectins [BR:
cjc04091
]
I-type lectins (Siglecs)
100406828 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
100406828
NCBI-ProteinID:
XP_035143953
Ensembl:
ENSCJAG00000011023
UniProt:
B0KWV8
LinkDB
All DBs
Position
X:complement(145131729..145156906)
Genome browser
AA seq
1252 aa
AA seq
DB search
MVVALRYVWPLFLCSPCLLIQIPEEYEGHHVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSFTITGNNSNFAQRFQGIYRCFASNKL
GTAMSHEIRLMAEGAPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKP
RLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLL
NVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRP
QPEITWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHGLLLANAYIY
VVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANG
TLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQ
ASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMV
ESRAQLLVVGSPGSVPRLALSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPE
KWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVN
VKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTST
FVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLVQ
VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNG
RGLGPASEFTFSTPEGVPGHPEALHVECQSNTSLRLHWQPPLSHNGVLTGYVLSYRPLDE
GGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGISDF
GNISATAGENYSVVSWVPREGQCNFRFHILFKALGEEKGGAYVSYSQSSYTQGDLQPDTD
YEIHLFKERMFQHRMAVKTNGTGRVRLPPAGFATEGWFIGFVSAIILLLLLLLILCFIKR
SKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIKPLGSD
DSLADYGGSVDVQFNEDGSFIGQYSGKKEKEVAGGNDSSGATSPINPAVALE
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggcgctgcggtacgtgtggcctctcttcctctgcagcccctgcctgcttatc
cagatccccgaggaatatgaaggacaccatgtgatggagccacctgtcatcacagaacag
tctccacggcgcctggttgtcttccccacagatgacatcagcctcaagtgtgaggccagt
ggcaagcctgaagtgcagttccgatggacgagggatggtgtccacttcaaacccaaggat
gaactgggtgtgactgtgtaccagtcgccccactctggctccttcacaatcacgggcaac
aacagcaactttgcccagaggttccagggcatctaccgctgctttgccagcaataagctg
ggcaccgccatgtcccatgagatccggctcatggctgagggtgcccccaagtggccaaag
gagacagtgaagcctgtggaggtggaggaaggggagtcggtggttctgccttgccaccct
ccccccagtgcagagcctctccggatctactggatgaacagcaagatcttgcacatcaag
caggacgagcgggtgactatgggccaaaacggcaacctctactttgccaatgtgctcacc
tccgacaaccactcagactacatctgccacgcccacttcccaggcacccggaccatcatt
cagaaggaacccattgacctccgggtcaaggccaccaacagcatgattgacaggaagcca
cgcctgctcttccccaccaactccagcagccacctggtggccttgcaggggcagccattg
gtcctggagtgcattgccgagggctttcccacgccaaccatcaaatggctgcgccccagt
ggccccatgccagccgatcgtgtcacctaccagaaccacaacaagaccctgcagctgctg
aacgtgggcgaggaggatgacggcgagtaccgctgcctggccgagaactcactgggcagt
gcacgacatgactactatgtcaccgtggaggctgccccgtactggctgcacaagccccag
agccatctgtatgggccaggagagactgcccgcctggactgccaagtccaaggcaggccc
caaccagagatcacctggagaatcaacgggatccccgtggaggagctggccaaggaccag
aagtaccggatccagcgtggtgccctgatcctgagcaacgtgcagcccagtgacacaatg
gtgacccagtgtgaggccggcaaccggcacgggctcctgctggccaatgcctacatctac
gttgtccagctgccggccaagatcctgactgcagacaatcagacatacatggctgtccgg
ggcagcactgcctaccttctatgcaaggcctttggagcacctgtgcccagtgttcagtgg
ctggacgaggatgggacaactgtacttcaggacgaacgcttcttcccctatgccaatggg
accttgggcattcgggacctccaagccaatgacactggacgctacttctgccaggctgcc
aatgaccaaaacaatgtgactattgtggctaacctgcaaattaaagatgcaactcagatc
acccagggtccccggagcaccattgagaagaaaggttcgagggtgaccttcacgtgccag
gcctcctttgacccctccttgcagcccagcatcacctggcgtggggacggccgagacctc
caggagcttggggacagtgacaagtacttcatagaggacgggcgcctggtcatccacagc
ctggactacagcgaccagggcaactacagctgcgtggccagcaccgagctggacatggtg
gagagcagggcacagctcttggttgtggggagccccgggtcggtgccgcggctggcactg
tctgatctgcacctgctgaagcagagccaggtgcgcctgtcctggagtcctgcagaagac
cacaatgcccccattgagaagtatgacattgaatttgaggacaaggaaatggcacctgag
aaatggtacagtctgggcaaggtgccagggaaccagacctctaccaccctcaagctgtcg
ccctatgtccactacacctttagggttactgccatcaacaaatacggccccggggagccc
agcccggtctctgagactgtggtcacacctgaggcagccccggagaagaaccctgtgaac
gtgaagggggaaggcaatgagaccaccaatatggtgatcacgtggaagccgctccggtgg
atggactggaacgccccccaggttcagtaccgcgtgcagtggcgccctcaggggacacga
ggaccgtggcaggagcagattgtcagcgaccccttcctggtggtgtcaaacacgtccacc
tttgtgccctatgagatcaaagtccaggctgtcaacagacagggaaagggcccagagccc
caggtcaccattggctactccggagaggattatccccaggcagtccctgagctggaaggc
attgagatcctcaactcaagcgccgtgctggtcaagtggcggccagtggacctagtccag
gtcaagggtcacctccgaggatacaatgtaacgtactggagggagggcagtcagagaaag
cacagcaagaggcacacccacagagaccatgtggtggtgcccgccaacaccaccagcgtc
atcctcagtggcttgcgaccctatagctcctaccacctggaggtgcaggcctttaacggg
cggggattggggcccgccagcgagttcaccttcagcaccccagagggagtgcctggccac
cccgaggcgctgcacgtggagtgccagtcgaacaccagtctgcggctgcactggcagccc
ccactcagccacaatggcgtgctcaccggctatgtgctctcctaccgccccctggatgag
gggggcaaggggcagctgtccttcaaccttcgggaccctgaacttcggacacacaacctg
accgatcttagtccccacctgcggtaccgcttccagcttcaggccaccaccaaagagggc
cctggtgaagccattgtacgggaaggaggcactatggccttatctgggatctcggatttt
ggcaacatctcagccacagcgggtgaaaactacagcgtcgtctcctgggtccccagggag
ggccagtgcaacttcaggttccatatcttgttcaaagccttgggagaagagaagggcggg
gcttatgtcagctacagccagagctcctacacgcagggggacctgcagcctgacactgac
tatgagatccacttgtttaaggagagaatgttccagcacaggatggctgtgaaaaccaat
ggcacaggccgcgtgaggctccctcctgcggggtttgccactgagggctggttcattggc
tttgtgagcgccatcattctcctgctcctccttctgctcattctctgcttcatcaagcgc
agcaagggcggcaaatactcagtgaaggataaagaggatacccaggtggactctgaggcc
cgaccgatgaaagatgagactttcggcgagtacaggtccctggagagtgacaatgaggag
aaggctttcggcagcagccagccctcgctcaatggagacatcaagcccctgggcagtgat
gacagcctggccgattatgggggcagtgtggatgttcagttcaatgaggatggctccttc
atcggccagtacagtggcaagaaggagaaggaggtggcagggggcaacgacagctcaggg
gctacctcccccatcaaccctgctgtggccctagaatag
DBGET
integrated database retrieval system
