Callithrix jacchus (white-tufted-ear marmoset): 100406885
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Entry
100406885 CDS
T03264
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03030
DNA replication
cjc03410
Base excision repair
cjc03420
Nucleotide excision repair
cjc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100406885 (RFC4)
03410 Base excision repair
100406885 (RFC4)
03420 Nucleotide excision repair
100406885 (RFC4)
03430 Mismatch repair
100406885 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100406885 (RFC4)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100406885 (RFC4)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100406885 (RFC4)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100406885 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
100406885 (RFC4)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100406885 (RFC4)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100406885 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
100406885 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_16
DUF815
AAA_22
AAA_11
AAA_30
Mg_chelatase
AAA_24
AAA_28
Gp44_lid
SLFN-g3_helicase
RuvB_N
AAA_19
AAA_5
ResIII
Viral_helicase1
AAA_7
TIP49_C
Motif
Other DBs
NCBI-GeneID:
100406885
NCBI-ProteinID:
XP_002758207
Ensembl:
ENSCJAG00000014480
UniProt:
U3ESW5
U3CKN0
LinkDB
All DBs
Position
15:complement(9507187..9523364)
Genome browser
AA seq
363 aa
AA seq
DB search
MQAFLKGTSISTKPPLTKERGVAATAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAERENVKISDEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVLAACQSGSFDKLEAVVKDLIDEG
HAATQLVSQLHDAVVENNLPDKQKSIITEKLAEADKCLADGADEHLQLISLCATVMQQLS
QNC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttcttaaaggcacatctatcagtaccaaaccaccgctgaccaaggagcga
ggagtagctgccactgcgggaagtagtggagagaacaagaaagccaaacctgttccctgg
gtggaaaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtggttgca
gtgctaaaaaagtctttagaaggagccgatctccctaatctcttgttttatgggccacct
ggaaccggaaaaacatccactattttggcagcagctagagaactctttgggcctgaactt
tttcgattaagagtgcttgagttaaatgcatctgatgaacgtggaatacaagtagttcga
gagaaagtgaaaaattttgctcagttaactgtgtcaggaagtcgttcagatgggaagcca
tgtccaccttttaagattgtaatcctggatgaggcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggaaaaggagtctaaaaccacccgattctgtcttatctgt
aactatgtcagtcgaataattgaacccctgacctcaagatgttcaaaattccgcttcaag
cctctgtcagataaaattcaacagcagcgattactagacattgctgagagggaaaatgtc
aaaattagcgatgagggaatagcttatcttgttaaggtgtcagaaggagacttaagaaaa
gccattacgtttcttcaaagtgctactcgattaacaggtggaaaggagatcacagagaaa
gtgattacagacattgctggggtaataccagctgagaaaatcgatggagtacttgctgct
tgtcagagtggctctttcgacaaactagaagctgtggtcaaggacttaatagacgagggt
catgcagcaactcagcttgtcagtcaactccacgatgcggttgtagagaacaacttacct
gataaacagaagtccattattacagaaaaacttgctgaagctgacaaatgcctagcagat
ggtgccgatgaacatttgcaactgatcagcctttgtgcaactgtgatgcagcagttatct
cagaactgttag
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