| Entry |
|
|---|
| Symbol |
ERCC2
|
|---|
| Name |
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
|
|---|
| KO |
|
|---|
| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100407061 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
100407061 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cjc03021]
100407061 (ERCC2)
03036 Chromosome and associated proteins [BR:cjc03036]
100407061 (ERCC2)
03400 DNA repair and recombination proteins [BR:cjc03400]
100407061 (ERCC2)
Enzymes [BR:cjc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100407061 (ERCC2)
Transcription machinery [BR:cjc03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100407061 (ERCC2)
Chromosome and associated proteins [BR:cjc03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100407061 (ERCC2)
DNA repair and recombination proteins [BR:cjc03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100407061 (ERCC2)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
22:complement(38111716..38132442)
|
|---|
| AA seq |
760 aa
MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDTHGREVPLPPGIYNLDDL
KALGRHQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESQETLQRIEQIAQQL |
|---|
| NT seq |
2283 nt +upstreamnt +downstreamnt
atgaagctaaacgtggacgggctgctggtctacttcccgtacgactacatctaccccgag
cagttctcctacatgcgggagctcaaacgcacgctggacgccaagggccatggagtgctg
gagatgccctcaggcactgggaagacggtgtcccttttggccctgattatggcataccag
cgggcatatccgctggaggtgaccaagctcatctactgctcgagaactgtgccggagatt
gagaaggtgatcgaagaacttcggaagttgctcaacttctatgagaagcaggagggcgag
aagctgccatttttggggctggctctgagctcccgaaaaaacttgtgtattcaccctgag
gtgacacccctgcgctttgggaaggacgttgatgggaaatgccacagcctcacagcttcc
tatgtgcgggcacagtaccagcatgacaccagcctgccccactgccgcttctatgaggaa
tttgacacccatgggcgtgaggtgcccctccctcctggcatctacaacctggatgacctg
aaggcgctggggcgacaccagggctggtgcccgtacttccttgcccgatattcaatcctg
catgctaacgtggtggtttatagctaccactacctcctggaccccaagattgcagacctg
gtgtccaaggaactggcccgcaaggctgtcgtggtcttcgatgaggcccacaacattgac
aatgtctgcatcgactccatgagcgtcaacctcacccgccggacccttgaccgctgccag
ggcaacctggagactctgcagaagacagtgctcaggatcaaagagaccgatgagcagcgc
ctgcgggacgagtaccgacgcctggtggagggactgcgggaggccagcgctgcccgggag
acggacgcccacctggccaaccctgtgctgcctgatgaggtgctgcaggaggcagtgccg
ggctccatccgcacagctgagcacttcctgggcttcctgcggcggctgctggagtacgtg
aagtggcggctgcgtgtgcagcacgtggtgcaggagagcccgcccgccttcctgagtggc
ctggcccagcgtgtgtgcatccagcgcaagcccctcagattctgtgctgaacgcctccgc
tccctgctgcacacgctggagatcactgaccttgctgacttctccccactcaccctcctt
gctaactttgccaccctcgtcagcacctatgccaagggcttcaccatcatcatcgagccc
tttgacgacagaaccccaaccattgccaaccccatcctgcacttcagctgcatggacgcc
tcgctggccatcaaacctgtattcgagcgcttccagtctgtcatcatcacatctgggacg
ctgtccccgttggacatctaccccaagatcctggatttccaccctgtcaccatggcaacc
ttcaccatgacgctggctcgggtctgcctctgccctatgatcatcggccgaggcaatgac
caggtggccatcagctccaagtttgagacccgggaggatattgctgtgatccggaactat
gggaacctcctgctggagatgtccgctgtggtccctgatggcattgtggccttcttcacc
agctaccagtacatggagagcaccgtggcctcctggtatgagcaggggattcttgagaac
atccagaggaacaagctgctctttattgagacccaggatggtgccgagaccagcgtcgcc
ctggagaagtaccaggaggcttgcgagaatggccgcggggccatcctgctgtcagtggcc
aggggcaaagtgtctgagggaatcgactttgtgcaccactacgggcgggccgtcatcatg
tttggtgtcccatacgtctacacgcagagccgcattctcaaggcgcggctggaatacctg
cgggaccagttccagatccgtgagaatgactttctcaccttcgatgccatgcgccacgcg
gcccagtgcgtgggtcgagccatcaggggcaagactgactatggcctcatggtctttgcc
gacaagcggtttgcccgtgcggacaagcgggggaagctgccccgctggatccaggagcac
ctcacagatgccaacctcaacctgactgtggatgaaggtgtccaggtggccaagtacttc
ctacggcagatggcacagcccttccaccgggaggatcagctgggcctgtccctgctcagc
ctggagcagctggagtcgcaggagacactgcagaggatagagcagattgctcagcagctg
tga |
|---|
