Callithrix jacchus (white-tufted-ear marmoset): 100407063
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Entry
100407063 CDS
T03264
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100407063 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
Other domain-containing proteins
Patched domain-containing proteins
100407063 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
100407063
NCBI-ProteinID:
XP_002807919
Ensembl:
ENSCJAG00000005108
UniProt:
F7D5U8
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All DBs
Position
X:22559202..22620614
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AA seq
888 aa
AA seq
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MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTKIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNSKVRMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFIMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEALQEKPAWYRFLLTARFSEDTSEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINIWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcaccctgtcttcttcgcctcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaggagagcgtggagcacctgctggcgccccagcac
agcctggccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccgtctctactcggacctgcagacccctgggcgctacggccgggtcatcgtcacctcc
ttccaaaaagccaacatgctggaccagcaccacaccgacctgatcttaaagttgcatgct
gctgtgaccaagatccaggttccaaggcctggttttaattacacgtttgcccatatatgt
atcctgaataatgataagacttgcatcgtggatgacatagtgcacgtcctggaagagcta
aagaatgctcgggccaccaatcggaccaattttgctatcacatacccaatcactcactta
aaggacgggagggctgtgtacaatgggcaccagcttgggggcgtcactgtgcacagcaaa
gaccgggtgaaatctgcagaggccatccagcttacctactacctgcagtcaatcaacagt
ctcaatgacatggtggctgagaggtgggagtccagcttctgcgacactgtcagactgttt
cagaaatccaacagcaaagtcagaatgtacccttacacgtcctcctcactgagggaagat
ttccagaagaccagtcgcgtgtcagaacgttacctggtcaccagcctgatcctggtggtc
accatggccatcctttgctgctctatgcaggactgcgtccgcagcaaaccctggctaggc
ctactcggattggtgaccataagcctggccactctcactgcagccgggatcatcaatctt
actggtgggaaatacaattctaccttcctgggagtccctttcatcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtt
aaagagagaactgcggcagtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcttcttcaactacctctatgtactctcgttt
tatggttccagcctagtgttcactggctacatagaaaacaattaccagcatagtatcttc
tgcaggaaagtcccaaagcctgaggcattgcaggagaagccggcatggtacaggtttctc
ctgacggccagattcagtgaggatacaagtgaaggcgaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaaccgcgacacaaaccattgag
tacactactgcccagcaaaagtactttagcaactacagtcctgtgattgggttttacatt
tatgagtctatagaatactggaacactagtgtccaagaagatgttctagaatacaccaag
gggtttgtgcgtatatcctggtttgagagctatttaaattatcttcggaaactcaatgta
tccactggcttgcctaagaaaaatttcacagacatgttgaggaattcctttctgaaagcc
cctcaattttcacattttcaagaggacatcatcttctctaaaaaatacaatgatgaggtc
gacgtagtggcctccagaatgtttttggtggccaagaccatggaaacaaatagagaagaa
ctctatgatctcttggaaaccctgaggagactttctgtcacctccaaggtgaagttcatc
gtcttcaatccgtcctttgtgtacatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctattcttctcggcattcctggtggcagat
tcactgattaatatctggatcactctaacagttgtgtctgtggagtttggagtgataggt
ttcatgacattatggaaagtagaactggactgcatttctgtgctatgcttaatttatgga
attaattacacaattgacaattgtgctccactgttatccacctttgttcttggcaaggat
tttacaagaactaaatgggtaaaaaatgccctggaagtgcatggggtagctattttacag
agttacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccttctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgagaggaaattgagtgtgtagaaatggtggatattgatagtacccgt
gtggttgaccaaattacaacagtgtga
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