Callithrix jacchus (white-tufted-ear marmoset): 100407163
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Entry
100407163 CDS
T03264
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100407163 (CARMIL1)
Membrane trafficking [BR:
cjc04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100407163 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Motif
Other DBs
NCBI-GeneID:
100407163
NCBI-ProteinID:
XP_002746212
Ensembl:
ENSCJAG00000010717
UniProt:
U3DPX1
LinkDB
All DBs
Position
4:3590504..3940964
Genome browser
AA seq
1371 aa
AA seq
DB search
MTEESSDVPRELIESIKDVIGRRIKISVKKKVKLEVKGDKVENRVLVLTSCRAFLVTARI
PTKLEVTFSYLEIHGVLCSKSAQMVVETEKGSISMKMASPEDVSEVLAHIGTCLRKIFPG
LSPLRIMKKVSMEPSERLASLQSLWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLIHLDLSGNVLRGDDLSHMYNF
LAQPNAIAHLDLSNTECSLDMVCGALLRGCLQYLAVLSLSRTIFSHRKGKEVPPSFKQFF
SSSLALMHINLSGTKLSPEPLKALLLGLACNHNLKGVSLDLSNCELRSGGAQVLEGCIAE
IHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAVQEDLKSA
ERLMRDAKNSKTLLPNLYHVGGASCAGASSLLSSPIQDTLESMAGEVTRVVDEQLKALLE
SMVDAAESLCPNVMKRAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILDALSHCHHKLADHFNRRGKTVPQQESLEIELAEEKPVKRSVITVEE
LTEIERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPLPS
LRQEKRSSGLMSELPSEEGKKLEHFTKLRPKRNKKQQPTQAAVCAANIVSQDGEQNGLMG
RVDEGVDEFFTKKVTKMDSKKWSTRGSESHELSEGGDEKKKRDSRKSGGFLNLIKSRSKS
ERPPTILMAEEPSSPKGAVRSPAADSPKKDTKATEPNGSSERIEEIKTPDSFEETQGEDT
GKVERSDSKSSPQGGRRYGVQVMGSGLLAEMKAKQEKRAVCAQKKLGNDAVSQDPSSPAL
NSGERLDGGVAVPKLHPGLPENRFGLGTPEKSTKAEPRVEAGSRSRSSSSTPTSPKPLLQ
SPKPSLAARPVIPQKPRTASRPDDIPDSPSSPKVALLPPVLKKVPSDKERDGQSSPQPSP
RTFSQEVSRRSWGQQAQEYQEQKQRSSSKDGHQGSKSSDSGEEAEKEFIFV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagagctctgatgttcccagggagttgatagaaagcataaaggatgttatt
ggcagaaggataaaaatttcagtgaagaagaaagtaaagttggaagttaagggagacaaa
gttgaaaacagagtgctggtgctcacatcttgccgagccttcctggtaacagcgcgaatc
cccaccaagctcgaggtaaccttcagctacctggagattcatggcgtcctttgcagcaag
tcagctcagatggttgtggaaactgagaagggcagcatctccatgaagatggcgtcgccc
gaggacgtgagtgaggtgctggctcacataggcacctgcctgaggaagatatttcctggc
ctctctccactgagaatcatgaaaaaagtctccatggagccatctgagcgcctggctagt
ctccagtctctgtgggacagccagactgtggctgagcagggcccctgtggtggattttct
cagatgtatgcctgtgtttgtgactggcttggattttcatacagggaagaagtacagtgg
gatgtggatacaatttatcttacccaagataccagggaattgaatttacaggattttagt
catcttgaccacagggacctgatacccatcattgctgctctggaatacaaccagtggttc
acaaagctgtcctccaaggacctgaagctgtccactgatgtctgtgaacagatcttgagg
gtggtgagtaggtccaatcgactggaagaattggtgttggaaaatgctggacttagaaca
gattttgcacaaaaactggccagtgctctagcgcacaatcccaactcaggactccacacg
attaaccttgctggcaacccgctggaggatcgaggtgtgtcctctttaagtattcaattt
gccaaactcccaaagggattaaagcatttaaatttatccaaaacctcattatcacctaaa
ggggtgaacagcctttctcagtcactcagtgccaatccactgaccgcctctaccctcatc
cacctcgacctctcagggaacgtccttcgtggagatgacctctcacacatgtacaatttt
ttggcccagccaaatgccattgctcatctggatttatccaatacagaatgttccctggac
atggtctgtggagctcttctccgtggatgccttcaatatttagctgtgctcagtctgtcc
agaaccatcttctctcaccggaaaggaaaagaagtacctccgtctttcaagcaatttttt
agtagttctctggctttgatgcacatcaacctttcaggcacgaaactgtctcctgagccc
ttaaaggcgctgttattgggcctggcttgtaatcataacttgaagggggtttctctggat
ctcagcaactgtgagctgagatcaggaggtgctcaagtgttagaaggctgcattgccgaa
atacacaacatcaccagcttggacatctccgacaacggtttagaatctgacctatctacc
ttaatagtgtggctcagtaaaaacagatcaatacagcacctggcgttaggcaaaaatttt
aataatatgaaatccaaaaatctgacacctgtattggacaacttagtacagatgattcaa
gacgaagaatcacctctgcagtccttgtccctggctgactcgaaactcaagaccgaggtc
accatcatcatcaatgccctgggaagcaacacctccctgaccaaagtggacattagcggg
aacggaatgggggacatgggagcgaagatgctggccaaagccctgcagatcaacaccaag
ctcaggactgtaatatgggacaagaacaacatcactgcccaaggctttcaggatatagct
gttgccatggaaaagaactacacgttaagatttatgccaattcctatgtatgatgcttct
caagccttgaaaacaaaccctgagaaaacagaagaggctctccaaaagatagaaaactac
ctgcttcgcaatcacgagaccagaaaataccttcaagagcaggcctaccgcctgcagcag
ggtattgtcaccagcactacccagcagatgattgacagaatatgtgtgaaagtacaagat
catctcaactccttacgaaattgtgggggagatgctgtccaggaagatttaaaatcagca
gagcggctcatgcgtgatgctaagaactctaaaacgttgttaccaaatttataccatgtt
ggtggtgcgtcttgtgcgggagccagtagcttattatccagccccattcaggacaccctg
gaatcaatggccggagaagtcacaagagtggtagatgagcaactaaaggcgttgcttgag
tccatggttgatgctgctgagagtctttgtcccaacgtgatgaaaagagcccacattcgg
caagacttgattcatgccagcaccgaaaagatttctattccacgtacctttgttaaaaat
gtcctgttggagcagtctggaattgatatccttaacaaaattagtgaagtaaagttgaca
gtggcctccttcctgtctgatcgaattgtggacgaaatcctggatgcactctcacattgc
catcataaactggctgaccatttcaacagacgtggcaagaccgttcctcaacaagaatcc
ttggagatcgagctggctgaggagaagccagttaaacgctccgtcatcacagtggaggag
ctaacagagatagagcgtttggaagatctggatacctgtatgatgactcctaaatccaaa
aggaagagtatccacagccgaatgctgcggcctgtttcgagggcctttgaaatggagttt
gatctagataaagctctggaagaggtaccgattcacatcgaagacccgcccctcccatcc
ctcaggcaggagaagcggagctcgggattaatgtctgagttgccctccgaagaggggaag
aagctggaacactttaccaaattaaggccgaaaaggaataagaagcagcagcccacccaa
gcagcggtctgtgctgccaacatagtctcccaagacggtgaacagaacggtctcatgggg
agagtggacgaaggtgtagatgaatttttcaccaagaaggtgaccaaaatggattccaag
aaatggtcaacaagaggctcagagtcgcatgagcttagtgaaggaggagatgaaaagaaa
aagcgagattctcggaaaagcggtggctttctcaatttaatcaaatcccggtccaagtcc
gagcggccaccaacgatcttgatggcagaagaaccctcgtcaccgaaaggggcagtcaga
agtccagctgcagacagtcccaagaaggacacaaaggccaccgagcccaatggcagttct
gaacggatagaggagattaaaacacctgactcctttgaagagactcaaggggaagacacg
gggaaggtggaacggagtgacagcaagagcagcccacaggggggccggaggtatggggtc
caggtgatgggcagtggtctcctggcagagatgaaagccaagcaagagaagagagctgtg
tgtgcacagaagaagcttgggaatgatgccgtatcccaggatccttccagcccagccttg
aacagcggagaacggttggatggaggtgtggcagtgcctaaactgcacccaggtcttcca
gagaaccgctttggtttgggaacaccagaaaagagcaccaaagcagaacccagagtggaa
gcaggctccaggtctcgaagctcatccagcacacctaccagcccgaagcccctcctgcag
tcccccaagcccagcctggcagcacggcccgtcatcccgcagaaaccaagaacagcctca
cggcctgacgacattccagactctccctccagcccgaaagttgcccttcttccacctgtc
ctgaaaaaagttccttcagacaaggagagagatggccagagtagcccccagcccagcccc
aggacattttcacaggaagtttcaaggagaagctggggccagcaggcccaggagtatcaa
gaacaaaagcagcggtcctccagtaaagatggccaccaaggcagcaagtctagtgactcc
ggggaagaagcagaaaaagagtttatttttgtgtga
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