Callithrix jacchus (white-tufted-ear marmoset): 100407228
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Entry
100407228 CDS
T03264
Symbol
SIX1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100407228 (SIX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100407228 (SIX1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100407228 (SIX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
100407228
NCBI-ProteinID:
XP_002754023
Ensembl:
ENSCJAG00000019128
UniProt:
U3E127
LinkDB
All DBs
Position
10:complement(91264415..91269207)
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AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
ARSSNYSLPGLTASQSSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctaccgtcgtttggctttactcaggagcaagtggcatgcgtgtgcgaggtt
ctgcagcaaggcggaaacctggagcgcctgggcaggttcctgtggtcactgcccgcctgc
gaccacctgcacaagaacgagagcgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgtgagctctacaagatcctggagagccaccagttctcgcctcacaaccac
cccaaactgcagcaactgtggctgaaggcgcattacgtggaggccgagaagctgcgcggc
cgacccctgggcgccgtgggcaaatatcgggtgcgccgaaaattcccactgccgcgcacc
atctgggacggcgaggagaccagctactgcttcaaggagaagtcgcggggcgtgctgcgg
gagtggtacgcgcacaatccctacccctcgccgcgtgagaagcgggagttggctgaggcc
actggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccga
gcagcggaggccaaggaaagggagaacactgaaaacaataactcctcctccaacaagcag
aaccaactttctcctctggaagggggcaagccgctcatgtccagctcagaagaagaattc
tcacctccccaaagtccagaccagaactcggtccttctgctgcagggcaatatgggccac
gccaggagctcgaactattctctccccggcttaacagcctcgcagtccagtcacggcctg
caggcccaccagcatcagctccaagactctctgcttggccccctcacctccagtctggtg
gacttggggtcctaa
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integrated database retrieval system
