| Entry |
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| Symbol |
COL18A1
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| Name |
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
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| KO |
| K06823 | collagen type XVIII alpha |
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| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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| Pathway |
| cjc04974 | Protein digestion and absorption |
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| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100407288 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:cjc04147]
100407288 (COL18A1)
00535 Proteoglycans [BR:cjc00535]
100407288 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:cjc00536]
100407288 (COL18A1)
Exosome [BR:cjc04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100407288 (COL18A1)
Proteoglycans [BR:cjc00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100407288 (COL18A1)
Glycosaminoglycan binding proteins [BR:cjc00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
100407288 (COL18A1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
21:49299090..49357446
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| AA seq |
1728 aa
MAPDPSGRCVLLLLFCCLVAAQADLLDLSWLWPSKDTSHTAATVPKPTAGPTMLVAPQNG
STELETAPGNPKPPSELLEGGQDTPTSAESLDAPEKNIAGVGAEILNVAEGIRSFVQLWN
DTTPTESETLALKTPVGPLVLPVPSDAPWENGTVLWPGHRAPSSPGPHTTEAGILPAPTL
SPPSLGRPLAPLTGPPGPLPSSGRASLSSLLGRAPPWGSVSDLDGQGRLPAASTPGTQLR
RPNVRPHTPLLHPLVMGFLGHMAPSAFSSGLPGALSQVAVTTLIWDSGAWVSHAATSVGP
GLTNHSALLGVDPEAPSGHCLPLPPSLTVCGRLGFSRSWLPNHLHHESGEQVRAAARAWG
GLLRTHYHPFLAWFFCLLLAXPCGRVPLPAPPPCRQFCEALQDVCWSRLAGGRLPVACTS
LPTQEDGYCVFTGPAAESIGEEVGLLQLLGDPLPQQVTQTEDPDVGLAYVFGPDANSGQV
ARYHFPSLFFHDFSLLFHIRPATEGPGVLFAITDSAQAVVLLGVKLSGVQDGHQDISLLY
TEPGASQTHTAASFRLPTFVGQWTQLALSVAGGSVTLYVDCEEFQRMPLARSSRGLELER
GAGLFVAQAGGADPDKFQGMIAELKVRGDPQVHCLDEDDDSDGASGDFGSGLGDAREPLG
VETGAALKPRLPTPPPVTAPPLAGGSSMEESRTEENEEQTTAPTLGAQTLPGSDSVSTWD
GSVRTPGGRMKEGGLKGQKGEPGVPGLPGRAGPPGSPCIPGPPGPPCPVSPQGPAGPALQ
PVPGPQGPPGLPGKDGSPGRDGKPGDPGEDGKPGDTGPQGFPGTPGDMGPKGDKGDPGVG
VRGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPG
EPGRFGMNSSDVPGPAGLPGVPGREGPPGIPGLPGPPGPPGREGPPGRTGQKGSLGEAGA
PGLKGSKGDPGPAGARGESGLTGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWL
TARGADGLQGPPGLPGLKGDPGMPGPPGAKGEVGADGAPGFPGLPGREGTAGPQGPKGDR
GSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGAVRSVPGSEGRPGFAGFPGPAGP
KGDLGSKGERGSPGPKGEKGEPGSIFSPDGSALGPAQKGAKGEPGFRGPPGPYGRPGYKG
EIGFPGRPGRPGMNGLKGEKGEPGDASLGIGMRGMPGPPGPPGPPGPPGTPLYDSNAFVE
LNRPGRPGLPGNRGPAGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDVGQKGE
RGELGGSGPPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGLQGPPGPPGPPG
PPGAPSFPGPHRQTISIPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWL
IFVAEEEELFVRVRNGFRKVQLEAQTLLTRGLDNEVAALQPPVVQLHDSNPHPWRGHPRP
TARPWRADDILASPPRLPEPQPYPGAPHHGSYVHLRPARPTSPPAHTHLNFQPVLHLVAL
NSPLTGSMRGIRGADFQCFQQARAVGLVGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLK
DEVLFPSWEALFSGSEGLLKTGARIFSFDGKDVLRHPTWPQKSVWHGSDPSGRRLTESYC
ETWRTDAPSVTGQASSLLGGSLLGQNAASCHHAYIVLCIENSFMTASK |
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| NT seq |
5187 nt +upstreamnt +downstreamnt
atggctcccgaccccagcggccgctgcgtcctgctgctgctcttctgctgcctggtggct
gcccaggccgacctgctggacctgagctggctatggcccagtaaggacaccagccacaca
gctgccacggtccccaagcccacagcaggccccaccatgcttgtggccccgcagaatggt
tccacagagctagagacagcccctggcaaccctaagccaccctcagagctgctggaaggc
ggccaggacacccccacttctgccgagagcctggatgcaccggagaagaacattgccggt
gtgggagccgagatcctgaacgtggccgaaggcatccggagctttgtccagctgtggaac
gacactactcccactgagagtgaaacgctggccctcaagactcccgtgggccccctcgtc
ctccctgtgccctccgatgccccctgggagaatgggaccgtgctctggcctggtcatcgt
gctccgagctctccaggcccccacacgaccgaggctggcatcctgcctgcacccacgcta
tcgcctccctccctgggcaggcccctggcaccactcacgggccccccagggccgctgccg
tcgtcaggtagagcttctctctcctccttgctgggcagggcgcctccctggggaagtgtc
tcggacctggatggccaaggacgcctgcccgctgcctccactcccggcacacagctccga
cgccccaacgtccgcccacacacgcctcttctgcatcccctggtgatgggtttcctgggc
cacatggccccctctgccttctcctctggcctcccgggtgccctgtctcaggttgcagtc
accactttaatctgggacagcggtgcttgggtgtcccacgcagctacttctgtggggcct
ggtctcactaatcactctgccctgcttggagtggaccccgaggccccctccggccactgc
ctgcccctgccgccctccctgacagtctgcggccgcctgggcttctcgcgttcctggctg
cccaaccacctccaccatgagagcggcgagcaggtgcgggctgcagcgcgggcatggggg
ggcctgctgcggacgcactaccaccccttcctcgcctggttcttctgcctgctgctggca
nccccctgcggcagggtcccgctgcccgccccaccgccctgccgtcagttctgcgaggcc
ctgcaggacgtgtgctggagccgcctggcggggggccggctgcctgttgcctgcacctcg
ctcccgacccaggaggacgggtactgtgtgttcactgggccggctgcagagagcatcggc
gaggaggtggggctgctgcagctcctcggggaccccctgccccagcaagtcacccagaca
gaagaccccgatgtcgggctggcttacgtctttggaccagatgccaacagcggccaggtg
gcccggtaccacttccccagcctcttcttccatgacttctcactgctgttccacatccgg
ccagccacggagggcccaggggtgctgttcgccatcacagactcggcgcaggcagtggtc
ttgctgggcgtgaagctctctggggtgcaagacggccatcaggacatctctctgctctac
acggagccaggcgcaagccagacccacacagccgccagcttccgcctccccaccttcgtc
ggccagtggacgcagttagcgctgagcgtggccggtggctccgtgaccctctacgtggac
tgtgaggagtttcagagaatgccactcgctcggtcctcacggggccttgagctggagcgt
ggcgctgggcttttcgtggctcaggcaggaggagcggaccctgacaagttccaggggatg
attgccgagctgaaggtgcgtggggacccccaggtacactgcctggatgaggacgatgac
tcggatggggcatccggagacttcggcagtgggctcggggacgcccgggagcctctcggg
gtggagacgggcgcagcgctaaaacccaggctccccacgccacccccggtcaccgcccca
cccttggctggaggcagcagcatggaagagtccagaactgaagaaaacgaggagcagacc
acggcgcctacattaggagctcagacgcttcctggctcagattctgtctccacgtgggac
gggagtgtccggaccccaggtggccgcatgaaagagggcggcctgaaggggcagaagggg
gagccaggtgttccgggcctgcctggccgggcaggccccccaggctccccatgcatcccc
ggtcccccgggtcccccgtgcccagtcagtccccagggtcctgcaggcccagcattgcaa
cctgtccccggaccacaaggacctccggggctgccgggcaaggatggcagcccgggaagg
gacggcaagccgggtgaccctggcgaggatgggaagccgggcgacacagggccacagggc
ttccctgggaccccaggggacatgggccccaagggtgacaagggcgaccccggggttgga
gtgagagggcccccaggaccccaagggcctccggggcctccaggaccctccttcagacat
gacaagctgacattcattgacatggaggggtctggttttggtggtgacctggaggccctg
cggggtcctcgaggcttccccggcccccctggcccccctggtgtcccaggcctgcctggt
gagcccggccgctttggcatgaacagctccgacgtcccaggacccgcaggtcttcctggt
gtgcctgggcgggagggtccccccgggattcctggtctaccgggacccccaggccctcca
ggaagagaggggcccccaggaaggactgggcagaaaggcagtctcggtgaagcaggcgcc
ccgggacttaaggggagcaagggagaccccggtcccgctggtgctcgaggggagagcggc
ctcacaggagcccccggacctgctggaccaccaggcccccccggaccccccgggccgcca
ggaccaggactccccgctggatttgatgacatggaaggctccggagggcccttctggttg
acagcccgaggcgctgatgggctgcagggacccccaggcctgccaggactcaagggggat
cctggcatgcctgggccaccgggggccaagggagaagttggagcagatggagcccctggg
ttccccggcctccccggcagagagggcactgctgggccccaggggccaaagggagacaga
ggcagccggggagaaaagggagatccagggaaggacggagtcgggcagccaggcctccct
ggcccccctggacccccggggcctgtggtctacgtgtcggagcaggacggagccgtccgg
agcgtgccgggatccgagggccggcccggcttcgcaggctttcctggacctgcggggccc
aagggcgacctgggctctaagggcgaacgaggctccccgggacccaagggtgagaaggga
gagcctggcagcatcttcagccctgatggcagtgccctgggccctgcccagaaaggagcc
aagggagagccgggcttccgaggacccccgggtccatatggacggcctgggtacaaggga
gagattggctttcctggacggccgggtcgccctgggatgaatggattgaagggagagaaa
ggggagccgggagacgccagccttggaattggcatgaggggaatgcccgggcccccgggg
cctccaggacccccaggccctccagggactcctctttacgacagcaatgcgtttgttgag
ttgaaccgccccgggcgtccaggattgccaggaaatcggggccctgcgggacccaagggc
gccaaaggagaagtgggcccccccggaccgccagggcagtttccgtttgacttccttcag
ttggaagctgaaatgaagggggagaagggagaccgaggtgacgtgggacagaaaggcgaa
aggggtgagcttgggggcagtggccccccgggccccccaggcccccctggctaccctggg
attccaggtcccaagggagagagcatccggggccagcccggcccacctggacctcaggga
ccccctggcatcggctacgaggggctccagggccctcccggccctccaggtccccccggc
cccccaggagccccgtcatttcctggccctcacaggcagaccatcagcattcccggccct
ccgggccctcctgggccccctgggccccctggaaccatgggtgcctcctcaggggtgagg
ctctgggccacgcgccaggccatgctgggccaggtgcacgaggtgcccgagggctggctc
atcttcgtggccgaggaggaggagctcttcgtccgtgtgcggaatggcttcaggaaggtc
cagctggaagcccagacgctactcacacgaggattggacaacgaagtggccgccttacag
ccccccgtggtacaattgcatgacagcaacccccatccctggaggggtcacccccgtccc
actgcgcggccctggcgggcagatgacatcctggccagcccccctcgcctgcctgaaccc
cagccataccccggagccccacaccacggctcctacgtgcacctgcggccggcacgcccc
acgagcccacctgcccatacccacctcaacttccagcctgtgctccacctggtcgcactc
aacagcccactgacgggtagcatgcggggcatccgcggggctgacttccagtgcttccag
caggcacgggctgtggggctggtgggcacgttccgcgccttcctgtcctcgcggctgcaa
gacctgtacagcatcgtgcgccgtgctgaccgggcagctgtgcccatcgtcaacctcaag
gacgaggtgctgttccccagctgggaggctctgttctcaggctcagagggcctgctgaag
accggggcacgcatcttttcctttgatggcaaggacgtcctgaggcaccccacctggccc
cagaagagcgtgtggcatggctctgaccccagcgggcgcaggctgacagagagctactgt
gagacgtggcggaccgatgccccttcggtcacaggccaggcctcctcgctgctgggcggc
agcctcctggggcagaatgccgccagctgccaccacgcctacattgtgctctgcatcgag
aacagcttcatgactgcctccaagtag |
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