Callithrix jacchus (white-tufted-ear marmoset): 100407378
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Entry
100407378 CDS
T03264
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100407378 (RC3H2)
04121 Ubiquitin system [BR:
cjc04121
]
100407378 (RC3H2)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100407378 (RC3H2)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100407378 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100407378
NCBI-ProteinID:
XP_017831441
Ensembl:
ENSCJAG00000020050
UniProt:
F7BIJ6
LinkDB
All DBs
Position
1:complement(168519919..168578391)
Genome browser
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVASTNGISNAENSVSQLISRSTDSTLRALETVKKVGKVGTNGQNAAGPSAD
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSPFLTRVPVYPPHSENVQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRADFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSLELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGELQSDYTEDATDTKPDRDIELELSALDTDEPDGQSEPIEEIL
DIQLGISSQNDQLLNGTAVENGHPVQQHQKEPPKQKKQSLGEDHVILEEQKTILPVTSCF
SQPLAVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacaccgtttgcaagacc
tgcttgaataaacttcatcgaaaagcttgtccttttgaccagactgccatcaacacagat
attgatgtacttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaattaagttaagtaatctaggtgagaataaacactatgaggttgcaaagaaa
tgcgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtcccatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtaagagccatgcgagcagctcgttcacttggagaa
agaactgtaacagaactgatattacagcaccagaaccctcagcaattgtctgccaatcta
tgggccgctgtcagggctcgaggatgccagtttttagggccagctatgcaagaagaggcc
ttgaagcttgtgttactggcattagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtacagagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttccctaatgcagctgaaggaagaatttcggagttatgaagcattacgcagagaacat
gatgcccaaatcgttcatattgctatggaagcaggacttcgtatttcacctgaacaatgg
tcctcacttttatatggtgatttggctcataaatcacacatgcagtctatcattgataag
ctacagtctccagaatcatttgcaaagagtgtccaggaattgaccattgttttacaacga
acgggtgacccagctaacttaaatagactgaggcctcatttagaacttcttgcaaacata
gaccctaatccagatgctgtttcaccaacatgggagcagctagaaaatgcaatggtagct
gttaaaacagtagttcatggccttgtggacttcatacaaaattacagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatacaagactagcatgtgccgagatctgcga
cagcaagggggttgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgccactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgttacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacagggaaaattgttgcaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaatctcacgtagtactgacagtaccttaagagctctggagact
gtgaagaaagtgggaaaagttggcactaatggtcagaatgctgctgggccctctgcagat
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagct
acctcagctgggccctctaatgttggaacagagctgaattctgtgcctcaaaaatccagc
ccatttctaactagagtaccagtatatcctccgcattctgaaaacgttcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagacaggatactatcca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtatgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcatctgtctatcagacatctttgcgggaaagatataactcattagat
ggatattactcggtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagat
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgtgcggatttctca
gagagtgtgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccaaagatgtaattgct
aattcaaatgctgtgttaatggacctagacagtggtgatgttaagagaagagtacatcta
tttgaaactcagagaaggacaaaagaagaagatccaataattccctttagtgatggaccc
atcatctcaaaatggggtgcaatttccagatcttcccgtacaggttaccataccacagat
cccgtccaggccactgcttcccaaggaagtgcgactaagcccatcagtgtatcagattat
gtcccttatgtcaatgctgttgattcaaggtggagttcatacggcaacgaggccacatca
tcagcacattatattgaaagggacagattcattgttactgatttgtctggtcatagaaag
cattccagtactggggaccttctgagccttgaacttcagcaggccaagagcaactcatta
cttcttcagagagaggccaatgctttggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttaccttaaatcttttaagcaaggaaattgaactgagaaatggagagtta
cagagtgattatacagaagatgcaacagatactaaacctgatagagatatcgagttagag
ctttcagcacttgatactgatgaacctgatggtcaaagtgaaccaattgaagagatcctg
gacatacagcttggcatcagttctcaaaatgatcagttgctaaatggaacggcagtggaa
aatgggcatccagtgcagcagcaccaaaaggagccaccaaagcagaagaaacagagttta
ggtgaagaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgcttt
agccagccactcgcagtgtctattagcaatgcaagttgcctccccatcaccacatctgtc
agtgttggcaacctcattctgaaaactcatgtcatgtctgaagataaaaacgacttttta
aaacctgttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
