KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100407381
Entry
100407381         CDS       T03264                                 
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X6
  KO
K04646  clathrin heavy chain
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04142  Lysosome
cjc04144  Endocytosis
cjc04721  Synaptic vesicle cycle
cjc04961  Endocrine and other factor-regulated calcium reabsorption
cjc05016  Huntington disease
cjc05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100407381 (CLTCL1)
   04142 Lysosome
    100407381 (CLTCL1)
 09150 Organismal Systems
  09155 Excretory system
   04961 Endocrine and other factor-regulated calcium reabsorption
    100407381 (CLTCL1)
  09156 Nervous system
   04721 Synaptic vesicle cycle
    100407381 (CLTCL1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    100407381 (CLTCL1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    100407381 (CLTCL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjc04131]
    100407381 (CLTCL1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100407381 (CLTCL1)
Membrane trafficking [BR:cjc04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    100407381 (CLTCL1)
Exosome [BR:cjc04147]
 Exosomal proteins
  Proteins found in most exosomes
   100407381 (CLTCL1)
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41 capSnatchArena Gp18_dom_I
Other DBs
NCBI-GeneID: 100407381
NCBI-ProteinID: XP_035122138
LinkDB
Position
1:complement(208265838..208371648)
AA seq 1635 aa
MAQILPIRFQEHFQLQNLGINPANIGFSTVTMESDKFICVREKVGEQAQVVIIDTNDPMA
LIRRPVSAESAIVNPASKVVALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWVSVNAVA
LVTETAVYHWSMEGDSQPIKMFDRHTSLAGCQVINYRTDEYQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIKENAKPSTLFCFAVRNSTGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKCGYLHLYDLESGVCIYMNCISA
DTIFVTAPHKPTSGIIGVNKKGQVLSVCVEEDNIVNYAANVLQNPELGLRLAIRSNLAGA
EELFVRKFGTLFAQGSYAEAARVAASAPKGILRTRETVQKFQSVPTQSGQASPLLQYFGI
LLDQGQLNKLESLELCHLVLQQGRKQLLEKWLKEDKLECSEELGDLVRTTDPMLALSVYL
QANVPSKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRISPEQGLQFSQMLVQDE
EPLANVNQIVDIFMENNLIQQCTSFLLDALKNNRPAEGLLQTWLLEMNLVHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQQALEHYTDLSDIKRAVVHTHLLNHEWLVNFFGSLSV
EDSMECLHAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFEFFKSYEGLFYFLGSIMN
FSQDPDVHLKYIQAACKTGQIKEVERICRESSCYNPEHVKNFLKEAKLTDQLPLIIVCDR
FGFVHDLVLYLYRNNLQRYIEIYVQKVNPSRTPAVVGGLLDVDCSEEVIKHLIMAVTGQF
STDELVAEVEKRNRLKLLLPWLESRIQEGCEEPATHNALAKIYIDSNNSPECFLRENAYY
DSSVVGRYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWAHIL
EETNPSRRQLIDQVVQTALSETRDPEEVSVTVKAFMTADLPHELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDALDIASIAISSALYEEAFAVFCKFDVNAS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIESYIRGDDPSSYLEV
VQAASRSNNWEDLVKFLQMARKKGRESHIETELIFALAKTSRLSELEDYINGPNNAHIQQ
AGDRCYEEGMYEAAELLYSNVSNFARLASTLVRLGQYQAAVDNSCKANSTRTWKEVCFAC
VDGQEFPLAQLCGLHIVIHADELEELICYYQDRGYFEELILLLEAALGLEQAHMGMFTEL
AILYSKFKPQKMLEHLELFWSRVNIPKVLKAAEQAHLWAELVFLYDKYEEYDSAVLTMMS
HPTEAWKGGQFKDIIAKVANVELCYRALQFYLDYKPLLINELLLVLSSRLDHTRTVSFFS
KAGQLPLVKPYLRSVQSHNNKSVNEALNHLLTEEEDYQGLRASIDAYDNFDNISLAQRLE
KHHLMEFRRIAAYLYKGNNQWAQSVELCKKDHLYKDAMQHAAESQDAELAQKLLQWFLEE
GKRECFTASLFTCYDLLRPDVVLELAWRHNLMNLAMPYFIQVMKEYLSKVDKLDALESLC
KQEEHVTDGACPSHV
NT seq 4908 nt   +upstreamnt  +downstreamnt
atggcgcagatcctccccattcgttttcaggagcacttccagctccaaaaccttggaatt
aatccagccaacattggattcagcacagtgaccatggaatctgacaagttcatctgtgtc
cgagagaaagttggcgagcaggcccaagtcgtgatcattgacacgaacgacccaatggct
ctgatccgacggcctgtctctgcagagagtgccatcgtgaatccagcctctaaggtggta
gctctgaaagctgggaagacacttcagatctttaatattgagatgaagagtaaaatgaag
gctcatactatggcagaagaggtgattttctggaaatgggtttctgtgaacgctgttgcc
ttagtaaccgagacagctgtctaccactggagcatggaaggagactcccagcccattaag
atgtttgacagacataccagcctggcgggctgccaggtgattaactaccggactgatgaa
taccaaaagtggctgctcctcataggcatctcagctcagcaaaaccgtgtagttggggca
atgcagctctactctgtggatcggaaggtttcacaacccatagaaggccatgccgctgcc
tttgcagagttcaagatcaaggagaatgccaagccttccacccttttctgctttgctgta
cggaattccacaggaggcaagttgcacatcattgaagttggacagcctgcagcaggaaac
cagccttttgtaaagaaagcagtagatgtgttttttcctccagaggcgcagactgatttt
ccagtggctatgcagattggagctaaacatggtgttatttacttgatcacgaagtgtggc
tatcttcatctgtacgacctagagtctggtgtgtgcatctacatgaactgtattagtgct
gacacaatatttgtcactgctccacacaaaccaacctctggaattattggtgtcaacaaa
aagggacaggtgctgtcagtttgtgttgaggaagataacattgtgaattatgcagccaac
gtgcttcagaatccagaactcggtctgcgtttggccattcgtagtaacctggctggggca
gaggagttgtttgtgagaaaattcgggaccctctttgcacaggggagctatgctgaagcc
gccagagtggcagcgtctgcaccaaagggaatcctgcgtaccagagagacggtccagaaa
ttccagagcgtacccactcagtctggccaggcttctccgttgctgcagtactttggaatc
ctgctcgaccagggtcagctcaataaacttgaatctttagaactttgccatctggttctt
cagcaggggcgtaagcaactcctagaaaagtggctgaaagaagataagctggagtgctca
gaggagctcggagacttggtcagaaccactgaccccatgcttgctctgagtgtgtacctt
caggcaaacgtgccaagcaaagtgatccagtgttttgcagaaaccggccaattccagaaa
attgttctctatgccaaaaaggttgggtacaccccagactggatctttctgctgaggagt
gtgatgaggatcagtccagaacagggcctgcagttttctcaaatgctagtgcaggatgag
gagccactggccaacgttaaccagattgtggacattttcatggaaaacaatttaattcag
caatgtacttccttcttattggatgccttgaagaataatcgcccagctgagggactcctc
cagacatggctgttggagatgaaccttgttcatgcaccccaggttgcagacgccatcctt
ggaaatcagatgtttactcattacgaccgggcccacatcgcccagctctgcgagaaggca
ggcctcctgcagcaggcattggagcactacactgacctctctgacatcaagagggctgtg
gtccacactcacctcctcaatcacgagtggcttgtcaatttctttggctccttgtcggtg
gaggattccatggagtgtctgcatgctatgctgtctgctaacatcagacagaaccttcag
ctatgtgtgcaggtggcctctaagtaccacgagcagctgggcacgcaggccctggtggag
ctcttcgaattcttcaagagttatgaaggcctcttctacttcctgggctcaatcatgaac
ttcagccaagacccagacgtgcatctgaaatacattcaggctgcctgtaagacagggcag
atcaaggaggtggagaggatatgccgggagagcagttgctacaacccagagcatgtgaag
aacttcctgaaggaggccaagctcacagaccagcttcccctcatcatcgtgtgtgatcgt
tttggctttgtccatgaccttgtcctgtatttataccgcaacaacctgcagaggtacatt
gagatctacgtgcagaaggtcaatcctagccggaccccagctgtggttggagggctcctt
gatgtggattgttctgaggaagtgattaaacacttaatcatggcagtgacaggacagttc
tctactgatgagttggtggctgaagtagaaaaaagaaataggctcaagctcctgcttccc
tggctggagtcccggattcaggaaggctgtgaggagcctgccactcacaatgcactggct
aaaatctacatcgacagcaacaacagccctgagtgcttcctgagagagaacgcctattat
gacagcagcgtggtgggtcgctactgtgagaagcgagacccccatctggcctgtgtcgcc
tatgagcgggggcagtgtgaccttgagctcatcaaggtttgcaatgagaattctctgttc
aaaagcgaggcccgctacctggtacgcagaaaggatccagagctctgggctcacatcctt
gaggagaccaatccatccaggagacagctgattgaccaggtggtacagacagcattgtca
gaaacacgggatcctgaagaggtttcggtcactgtcaaagcctttatgacagctgacctg
cctcatgaactgattgaattgctggagaagatagttctggataactctgtcttcagcgag
cacaggaatctacagaatctgctgatcctgactgccatcaaggcagaccgcacacgggtc
atggagtacatcagccgcctggacaattatgacgcactggacatcgcaagcatcgctatc
agcagcgcgctgtatgaggaggcctttgcagtcttctgcaagtttgatgtgaacgcctca
gcagtccaggtcctgattgagcacattggaaacctggaccgggcatatgagtttgcggag
agatgcaatgagcctgctgtgtggagtcagctggcccgagcccagctccagaaagactta
gtgaaggaagccatcgagtcctatatcagaggggatgacccttcctcttacctggaagtt
gttcaggcagccagcaggagcaacaactgggaggatctggttaaatttctgcagatggct
aggaaaaagggtcgtgagtcccatatagagactgaacttatttttgccttggctaaaaca
agccgtctttctgagctagaagattatattaatggacccaacaatgcccacatccagcag
gctggagaccgctgttacgaggagggaatgtacgaggctgccgagctgctctatagcaat
gtttctaactttgctcgcctggcttccaccttggttcgcctcggtcagtatcaggcagca
gtggacaacagctgcaaggccaacagcacccggacgtggaaggaggtgtgctttgcctgc
gtggatggacaggagtttcctctcgctcagctgtgtggtcttcacatcgtcattcatgca
gatgagctggaggagctgatatgctattaccaggatcgtggctactttgaggagctgatc
ttgctgctggaagcggctctgggcttggagcaggcccacatgggcatgttcacagaactg
gccatcctctactccaaattcaagccacagaagatgctggagcacctggagctcttctgg
tcccgtgtcaacatcccaaaggtgctgaaggctgcagagcaggcgcacctgtgggctgag
ctggtgttcctctatgacaagtacgaggagtacgacagtgctgtgctcaccatgatgagc
caccctactgaggcctggaaggggggtcagttcaaggacatcattgccaaggttgccaac
gttgaactctgttacagagccctacagttctatttggattacaaaccactcctcatcaat
gagctgctgctggtgctgtcctcccggctagaccacacccggacagtcagtttcttttca
aaggcaggtcagctgcccctggtgaaaccttacctgcggtcggtccagagccacaacaac
aagagtgtgaatgaggcgctcaaccacctgctgacagaggaggaggactatcagggctta
cgggcatctatcgatgcctatgacaactttgacaacatcagcctggctcagcggctggag
aagcaccacctgatggagttcaggcgcattgcggcctatctctacaagggcaataaccag
tgggcccagagcgtggagctctgcaagaaggatcatctctacaaggatgccatgcagcat
gccgcagagtcacaggatgctgagctggcccagaagttgcttcagtggttcctggaggaa
ggcaagagggaatgcttcacagcctctctcttcacctgctatgacctgcttcgcccagac
gtggtgctcgagctggcttggaggcacaacctcatgaacttggccatgccctacttcatc
caggtgatgaaggagtacctgagcaaggtggacaaactggatgccttggagagtctgtgc
aagcaggaggagcatgtgacggatggagcctgcccctctcatgtttga

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