Callithrix jacchus (white-tufted-ear marmoset): 100407391
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Entry
100407391 CDS
T03264
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X2
KO
K16175
protein scribble
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04390
Hippo signaling pathway
cjc04530
Tight junction
cjc05165
Human papillomavirus infection
cjc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100407391 (SCRIB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100407391 (SCRIB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100407391 (SCRIB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100407391 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_9
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
100407391
NCBI-ProteinID:
XP_035132846
Ensembl:
ENSCJAG00000021467
LinkDB
All DBs
Position
16:52122554..52143135
Genome browser
AA seq
1721 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG
GLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LMALPRSLGKLTKLTNLNVDRNQLEALPSEIGGCVALSVLSLRDNRLAVLPPELAHTSEL
HVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDTRTGEKVLTCYLLPQQP
PPSLEDAGQQGSPSESWSDAPPSRISVIQFMEAPAGDEDAEEAAAEKRGLQRRATPHPSE
LKVMKRSIEGRWSEPCPCQPDPGLPLPVEEEKRLSAESGVSEDSRPSASTVSEAEPEGPS
AEAQGQSQQEATTAGGEEDAEEDYEEPTVHFAEDVLLPRDDRESEEGQPEAPWSLPGGRQ
RLIRKDTPHYKKHFKISKLPQPEAVVALLQGMQPDGEGSAAPRSWHNGPHAPWAPRAQKE
EEEEEEEARPQEEEEEEEDRAEEEETSTEEDKEVAVVSAPSVKGVSFDQANNLLIEPARI
EEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLE
GAEHHEAVEALRGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGGGLRLPLL
PPESPGPLRQRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTL
QVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLEREAGGPLPSSSPPHSSSPLTVA
VTTTTPTSTTTPSITTVTPGDAGLLRLAPGLLAATLEGPYPVEEIRLPRAGGPLGLSIVG
GSDHSSHPFGVQEPGVFISKVLPRGLAARSGLRVGDRILAVNGQDVREATHQEAVSALLR
PCLELSLLVRRDPAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVS
PMGAAGRDGRLRVGLRLLEVNQQSLLGLTHSEAVQLLRGVGDTLTVLVCDGFDASTSAAL
EVSPGVIANPFAAGISHRNSLDSISSIDRELSPEGPGKEKELPGQTLHWSEATEAAGQGL
EPLKLDYRALAAVPSAGSVQRVPSGAAGGKTAEAPHSPSGQQTKPGVIQPLAQAWPRGSP
APRGRGGPRSPPSPPSPDELPANVKQAYRAFAAVPTPHPPEDTPAQLPTPAASPEQLSFR
ERQKYFELEVRMPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQMWEVAEAGAGARL
ALDAETLGEEEQEDEEPLWAGPSPTAGQSPVSPPPPGGAAPVRTAKAERRHQERLRVQSP
ELPAPERALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSRSQEGRGTRGPLERL
AEAPSPAPTPSPTPVEGPWVWEVGGSACRMGRFQHSLLVPPDLGPQTSTSPGRLPLSGKK
FDYRAFAALPSSRPVYDIQVPGLQASACLPPCLCLPLPLSAPAGPPRTLPSPRLSIPSLR
QLGSVGLRAGSTPVHVGGLGQDWRWPDQHSPHHSRRTLLRS
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctgtggcgctgcaaccggcacgtggagtcggtggacaagcgg
cactgctcgctgcaggcggtgcccgaggagatctaccgctacagccgcagcttggaggag
ctgctgctcgacgccaaccagctgcgcgagctgcccaagccatttttccggctgctgaac
ttgcgtaagctgggcctgagtgacaacgagatccagcggttgcctcccgaggtggccaac
ttcatgcagctggtggagctggacgtgtcccggaacgacatccctgagatcccagagagc
atcaagttttgcaaagctctggagattgcggacttcagcgggaaccccctctccaggctc
cctgatggtttcacacagctgcgcagcctggctcatctggccctgaatgatgtgtccctg
caggcgctgcctggggacgtgggcaacctcgccaacctggtgaccctggagctccgggag
aatctgctgaagtccctgccagcgtccctgtcttttctggtcaagctggaacagctggat
ctgggaggcaacgacctggaagtgctgccggacaccctgggggctctgcccaaccttcgg
gagctgtggctggaccggaaccagctgtcggcactgcccccggagcttgggaacctgcgt
cgcctggtgtgcctggacgtgtcagaaaaccggctagaggagctgccagccgagctcggt
gggctggtgctgctcacggacctgttgctgtcccagaacctgctgcagcgactgcctgat
ggcattggtcagctgaagcagctgtccatcctaaaggtagaccagaaccggctgtgcgag
gtgaccgaggccattggggactgtgagaacctctctgagctgattctcacggagaatctg
ctgatggccctgcctcgctccctgggaaagctgacgaaactgaccaacctcaacgtggac
cggaaccagctcgaggcactgccgtcagagattgggggctgcgtggcgctcagcgtcctc
tccttgagggacaaccgcctggctgtcctgccaccagagctggcccacacgtccgagctg
catgtgctggatgtggcagggaaccggctgcagagtctgccgttcgcgctcacccacctc
aacctcaaggctctgtggctggcagagaaccaggcgcagcccatgctccggttccagacg
gaggatgatacccggactggcgagaaggtgctcacctgctacctgctgccccagcagccc
ccacccagcctcgaggatgctgggcagcaggggagcccctcagagagctggagtgatgcc
cccccaagccgcatcagcgtcatccagttcatggaggcccctgcaggtgacgaggacgcc
gaggaagctgcagctgagaagcggggcctccagcgccgggccacacctcaccccagcgag
ctcaaggtgatgaagaggagcatcgaagggcggtggagtgagccctgcccttgccagcca
gaccctgggttgcccttgcctgtggaggaggagaagcggctgagcgctgagtcaggcgtg
agtgaagactcccgcccatctgccagcacagtttctgaggccgaacccgaaggtccatcc
gctgaggcacaggggcagagccagcaggaagccacgactgctggcggggaggaagacgcc
gaggaggactacgaggagcccacagtgcatttcgcggaggacgtactgctgcccagggat
gacagggagagcgaggaggggcagcctgaggccccctggtccttgccaggcgggaggcag
cggctcatccgcaaagacacacctcactacaaaaagcacttcaagatctccaagctgccc
cagcccgaggctgtggtggcccttctgcagggcatgcagcccgatggggagggctctgcg
gctcccaggagctggcacaatggcccccatgcaccctgggctcctcgggctcagaaggag
gaggaagaggaggaagaagaggccaggcctcaggaggaggaggaggaggaggaagacaga
gctgaagaggaggagaccagcactgaggaggacaaggaggtggctgtagtttctgcaccc
tctgtcaagggggtgtcgtttgaccaggccaataacctgctgatagagcctgctcgcatt
gaggaggaagagctgactctcaccatcctgcggcagactgggggcctgggcatcagcatt
gcgggtggcaagggttccacaccctacaagggggatgatgagggcatattcatctctcgg
gtgtccgaggaaggccctgcagcccgggctggtgtccgcgtgggtgacaagctcctcgag
ggcgccgagcaccatgaggctgtggaggcactccggggggccggcactgctgtgcagatg
cgagtgtggcgcgagcgcatggtggagcctgagaacgcagtcactatcacgcctctgcgg
cccgaggatgactacagtccccgggagcggcggggagggggcctgcgcctgcccctgctc
ccccccgagagcccgggacccctccggcagcgccacgtggcctgcctggctcgaagtgaa
aggggactgggcttcagcattgctggtgggaaaggctccacaccctaccgggctggtgat
gcgggcatcttcatctcccgcatcgccgaggggggtgctgctcaccgtgctggcactctg
caggtcggcgaccgagtcctctctattaacggagtggatgtgaccgaggccaggcatgac
catgccgtctccctgctgactgctgcctcccccaccatcgccctgctgttggagcgggag
gctgggggccctcttccttccagctctccaccacattcctcctcacccctcaccgttgcc
gtgaccaccaccacccccaccagcaccaccacccccagcataaccactgtcacccccggg
gatgctgggttgctgaggctggcccccggcctgctagccgccaccttggaagggccatac
ccagtggaggagatccgtctgccgagagcggggggccctctgggtcttagtatcgttgga
ggctctgaccactccagccacccgtttggtgtccaggagcctggtgtgttcatctccaag
gtgctcccgcggggcctagctgctcgcagtggcctgcgggttggggaccgcatcctggca
gtgaacgggcaagacgtgcgggaggccacgcaccaagaagctgtcagtgccctgctccgg
ccctgcctggagctgtccctgctggtgcgaagggacccagctcccccaggcttacgggag
ctgtgcatccagaaggcacccggggagaggctgggcatcagcatccgagggggcgccagg
ggccatgctggcaacccccgtgaccccacagacgagggcatctttatctccaaggtgagc
cccatgggggcagctgggcgtgatggccggctacgtgtgggtttgcggctgttggaggta
aaccagcagagcctgctgggcctgacacacagcgaggcggtgcagctgctacgcggtgtg
ggcgacaccctcaccgtgctggtgtgtgatggctttgacgccagcacctctgcagccctg
gaggtgtccccaggtgtcattgccaacccctttgcggcaggcatcagccaccggaacagc
ctggacagcatctcgtccattgaccgggagctgagtcctgagggcccaggcaaggagaag
gagctgcctggacagaccctgcactggtccgaggccacagaagccgcaggtcagggtctg
gagcccctgaagctggactaccgtgccctggccgccgtgcccagtgctggcagcgtgcag
agggtaccgtctggagcagctggagggaagacagccgaagccccccactcccctagtggc
cagcagacaaaaccaggggtgatccagccattggctcaggcctggccaaggggctcccca
gcccccaggggcagaggtggtccccgctccccaccctccccgccctccccggatgagctg
cctgccaacgtgaagcaggcctacagagccttcgcagctgtgcccactccacaccctcct
gaggacacccctgcccagctccccacgcctgcggcctccccagagcagctctccttccgg
gaacggcagaagtactttgagctggaggtgcgcatgccccaggccgagggcccccctaag
cgcgtgtccctggtgggtgccgatgacctgcggaagatgcaagaggaggaagcccggaaa
ctgcagcagaagagagcacagatgtgggaggtggcggaagccggggccggagcgaggctc
gccctggatgccgagaccctgggcgaggaggagcaggaagatgaggagccactgtgggcc
ggcccaagccccactgcagggcagagcccagtgtcccccccacccccgggaggtgccgcc
ccggtgcggacagccaaagctgagcggcgccaccaggaacggcttcgcgtgcagagtcca
gagctgccagcacctgagcgtgccctgtcccctgctgagcgccgggccctggaggccgag
aagcgtgcgctctggagggcagcaaggatgaagtcgctggagcaggacgctctccgagca
cagatggtcctcagcaggtcccaggagggccggggcactcgggggcccctggagcgtctg
gccgaggccccttcccccgcacctaccccgtcacccacccctgtggaaggtccgtgggtc
tgggaggttggggggtcagcctgccgcatgggccgcttccaacactcgcttcttgtcccc
ccagacctcggcccccagaccagcacctccccgggacgcctgcctttgtctggaaagaag
tttgactacagggcctttgcagccctgccttcttccagacctgtctatgacatccaggta
cccggcctccaggcctctgcatgcctgccaccctgcctgtgtctgccactgcctctgtct
gctcccgcagggcctccccgcactctgccctcgccccgcctctccatcccctccctccgt
cagctgggctctgtgggcctcagggctgggagcacacctgtccacgtgggtggtttgggg
caggactggcgctggcctgaccaacactctccccatcacagtcgccggactttgctgagg
agttga
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integrated database retrieval system
