Callithrix jacchus (white-tufted-ear marmoset): 100407591
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Entry
100407591 CDS
T03264
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4 isoform X2
KO
K15615
homeobox protein SIX4
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100407591 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100407591 (SIX4)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100407591 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100407591
NCBI-ProteinID:
XP_002754024
Ensembl:
ENSCJAG00000019133
LinkDB
All DBs
Position
10:complement(91331674..91346345)
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AA seq
773 aa
AA seq
DB search
MIASAADIKQENGMESASEGQEAHREVAGGAAVGLSPPAPAPFPLEPGDAATAAARVSGE
EGAVAAAAAGEAADQVQLHSELLGRHHHAAAAAQTPLAFSPDHVACVCEALQQGGNLDRL
ARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKA
RYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPS
PAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSP
HPLSSSSDGVTNLSLSGHMEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSF
IQGPSGVILNGLNVGNTQAVALNPAKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSAA
NSAATTSYSPSVPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPN
SGANSQFLNGSIGFSSLQLPPVSVTASQGNISVSSSTSDGSTFTSESATIQQGKVFLSSL
APSAVVYTVPNSGQTIGSVKQEGLERSLVFSQLMPVNQNAQVNANLSSENISGSGLHPLA
SSLVNVSPTHNFSLSPPTLLNPTELNPDIADSQPMSAPVASKSTVTSVSNTNYATLQNCS
LITGQDLMSVPMTQAALGEIVPTAEDQVGHPSPAVHQDFVREHRLVLQSVANMKENFLPN
SESKATSSLMMLDSKSKYVLDGMVDTVCEDLETDKKELAKLQTVQLDEDMQDL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaagtgcggcggacatcaagcaggagaatgggatggaaagcgcctcggaaggg
caggaggcgcaccgagaagtggcggggggcgcggcggtggggctgagccccccggctcca
gccccttttcccctggagccgggggacgccgcgaccgctgccgccagggtgagtggcgag
gaaggggcagtggcggcggcggcggccggagaggcggcggatcaggtacaactccactcg
gaacttctgggcaggcaccaccacgccgccgccgccgcgcagaccccgctggccttctcg
cccgaccacgtcgcctgcgtgtgcgaggcactgcagcaggggggcaacctggaccgcctg
gcccggttcctgtggtccctgccccagagcgacctgctacgtggcaacgagagcctgctg
aaggcgcgggcgctcgtggccttccaccagggcatctaccccgagctctacagcatcctc
gagagccacagcttcgagtcggccaaccacccgctgctgcagcagctctggtacaaggcg
cgctacaccgaggccgagagagcccgcggccggccgctgggagccgtggacaagtaccgg
ctgcgcaggaaattccccctgccccgcaccatctgggacggcgaggagacggtgtattgt
ttcaaggagaagtcgcgcaatgcgctcaaggagctctacaagcagaatcgctacccttcg
cccgccgagaagcggcacctggccaagatcaccggcctctccctcacccaggtcagcaac
tggttcaagaaccgccggcagcgcgaccggaacccctccgagacccagtctaaaagtgag
tcagatggcaaccccagcactgaagatgaatccagcaagggacatgaggatttatctcct
cacccactctccagttcatctgatggcgtcaccaacctcagcctttccggtcatatggag
ccagtatatatgcaacaaattggaaatgctaagatatcattaagctcttctggagttctg
ttgaatggaagcttggtacctgcaagtacttcacctgtcttccttaatggaaattctttt
attcagggacccagtggagttatccttaatggattaaatgtgggaaatacacaggcagtg
gcactgaacccagcaaaaatgtcatcaaacattgtgagcaatggtatatccatgactgac
atactggggtctacctcccaggatgtgaaggaattcaaagtcctccagagttctgctgct
aactcagcagccaccacgtcctacagccccagtgtccctgtctcattcccagggctgata
cccagcactgaggtgaaaagagaaggcattcaaacagtggcttcccaggatgggggctct
gtagtgacttttactacaccagtgcaaattaaccagtatgggattgtccagatccccaat
tctggagcaaacagccagttccttaatgggagcattggattctcttcactgcagctgccc
cctgtgtcagtgacagcttcacaaggtaatatttcagtaagctcaagcacttcagatggg
agcacatttacaagtgagtcggccacaatccagcaaggaaaggttttcttgagctctctt
gctcccagtgcagtggtatacacggttcctaattcaggtcagactataggatctgtgaaa
caggaaggcttggagaggagcctggtattttctcagttgatgcctgtcaatcagaatgca
caagtaaatgcaaacctatcttctgaaaacatctcggggagtggcctccatccactggcc
tcctcgttagttaatgtttctccaactcacaacttttccctcagtccccctacactacta
aatcccactgagctaaaccctgacattgccgatagccagccaatgtctgcaccggtggca
agcaaatctactgtgacatctgtcagcaacactaactatgcaactcttcagaactgttcc
cttattactggtcaagacctaatgtcagtccctatgactcaagctgcccttggggaaata
gttcctacagctgaagaccaggtaggtcacccctccccagcagtacatcaggattttgtc
cgagaacatcgtttggttctgcagtcggtagctaacatgaaagagaatttcttaccaaat
tctgagagcaaagcaacaagtagcttaatgatgctggactctaaatccaagtatgtgcta
gatggcatggttgatactgtctgtgaagacctggaaacagataaaaaagagcttgccaag
ctccagactgtccagttagatgaagatatgcaagacttataa
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