KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100407640
Entry
100407640         CDS       T03264                                 
Symbol
SDE2
Name
(RefSeq) splicing regulator SDE2 isoform X1
  KO
K25059  replication stress response regulator SDE2
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjc03041]
    100407640 (SDE2)
   03032 DNA replication proteins [BR:cjc03032]
    100407640 (SDE2)
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100407640 (SDE2)
Spliceosome [BR:cjc03041]
 Complex C
  Other components
   Complex C specific factors
    100407640 (SDE2)
DNA replication proteins [BR:cjc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100407640 (SDE2)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100407640 (SDE2)
SSDB
Motif
Pfam: Sde2_N_Ubi_vert SDE2 SDE2_2C
Other DBs
NCBI-GeneID: 100407640
NCBI-ProteinID: XP_002760635
Ensembl: ENSCJAG00000012685
UniProt: F7IKP2
LinkDB
Position
19:19357955..19372909
AA seq 451 aa
MAEAAAVVWIRGPGFGCKAVRCASARSTVWDFIHRHCQDQDVPVEYFFVKCNGSLINTSD
TVQHGAVYSLEPRLFGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE
WVKQQAEREAEKEQRRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS
KMVSAEVSESRKRQRPTRSKTDRGAGMGKKRCFWLGMEGLETVEGSSSESSDDDSEEALS
TSRISFHAPKHGSDGVKMTAKFPSSSQRARVVNTDPDSPEQLQIAVTDSGRHISKDSCAE
LGESKEHMESRMVTETEETQENKAESKESIEEESTGAGLNKEKETKEGTDEERVAEVALE
VKENIAVAKLQESQPGDTVIGKETIDLLAYNSVAELELLGLEKLKCELMSLGLKCGGTLQ
ERAARLFSVRGLAKEQIDPALFAKPSKGKKK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcggaggccgcggcagttgtgtggattcgcggccccggctttgggtgcaaggcggta
cggtgtgcctcggctcggtccaccgtctgggattttatccaccggcactgccaagatcag
gatgttccagtggaatacttctttgtgaaatgcaatggatcactcattaacaccagtgac
acagtgcagcatggagccgtgtatagcttggaacccagacttttcggtggaaaaggaggt
tttggatctatgctccgagcacttggtgctcaaattgagaagacaaccaatcgagaagct
tgccgggatctcagtggaaggagactacgcgatgtcaatcatgaaaaagcaatggctgaa
tgggtaaaacaacaagctgagcgagaggctgaaaaggagcagaggcggctggagcgactg
caacggaagcttgtagaacccaaacactgctttaccagccctgactaccagcagcagtgc
catgagatggctgagcgtctggaggattccgtcctcaaaggtatgcaggctgcctccagc
aagatggtttcagcagaagtcagtgagagtcggaaacggcaaaggcctaccagatctaaa
acagacagaggagccggcatggggaagaagagatgcttctggttgggcatggagggacta
gagactgtagaagggtccagctcagagagctcagatgatgacagtgaagaagcactgagc
acttcaagaatcagtttccatgctcccaaacatggcagcgatggtgtgaagatgacagcc
aaatttcccagtagttctcagagggcaagagtagtgaatactgaccctgactcaccagaa
caactgcagatcgcagtgactgactctgggcggcatatttcaaaagactcatgtgctgag
ctgggggagtccaaagagcacatggaaagcaggatggtgacagaaacagaagagacccag
gagaataaggcagagagtaaagaatccatagaagaggaatccactggggctggactgaat
aaggagaaagagacaaaagaagggactgatgaggaaagagttgctgaggtagcacttgaa
gttaaggaaaacattgccgttgccaaactgcaggagagccagcccggagacacagttatt
ggtaaggaaactatagatttattggcgtacaactctgttgcagaactggagttgctgggt
ttggagaagctcaagtgtgaactgatgtccctcggactgaaatgtgggggcactttacag
gagcgggcagcaagactcttctctgtcagaggactggcaaaggagcaaattgacccggct
ttatttgccaagccttcgaaagggaagaagaaatga

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