Callithrix jacchus (white-tufted-ear marmoset): 100407666
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Entry
100407666 CDS
T03264
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100407666 (RAI1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100407666 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
100407666
NCBI-ProteinID:
XP_002747926
Ensembl:
ENSCJAG00000008947
UniProt:
F7B730
LinkDB
All DBs
Position
5:complement(65466759..65596258)
Genome browser
AA seq
1906 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPSYE
GGAGTPSGTAASVAADKYHRGSKALPTQQALQGRPAFPSYSAQDSSPYPGRYAGEESLQA
WGAPQPPPPQPQPLPSGVGKYDENLMKKTAVAPSRQYAEPGAQVPFRTHSLHVQQPPLPQ
QPLAYPKLQRQKLQNDIASPLPFPQGTHFPQHSQSFPTSSTYSSSVQGGGQGAHSYKSCT
APTAQPHDRPLTASSSLAPGQRVQNLHAYQSGRLSYDHQQQQQQQQQQQQQQALQSRHHA
QETLHYQNLAKYQHYGQQGQGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSST
PSPLMPNLENFPYSQQPLSTGAFPSGITDHSHFMPLLNPSPTDATSSVDTQAGNGKPLQK
DKLPENLLSDLSLQSLTALTSQVENISSTVQQLLLSKAAVPQKKGVKNLVSRTPEQHKSQ
HCSPEGSGYSAEPAGTPLSEPLSSTPQSTHAEPQEADYLSGSEDPLERSFLYCSQARGSP
ARVNNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKFVAGERDCPRLLLS
ALAQEDLASEILGLQEAIGEKAEKAWAEAPSLAKDSSKPPFSLENHSACLDSVAKGAWPR
PGEPEALPDPLQLDKGGTTKDFSPGLFEDPSMAFATPDPKKTTGPLSFGTKPTLGAAAPD
PTTAAFDCFPDTTAASSADSANPFAWPEENLGDACPRWGLHPGDLTKGLEQGGKASDGVS
KGDAHEASACLGFQEEEPPGEKVVSLPGDFKQEEPGGVKEEAGGLLQCPEVGKADRWLED
SRHCCSTADFGDLPLLPPTSRKEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKAPLICT
KEEVEEVLDSKASWGSPCHLSGESVILLGPTVGTESKVQSWFESSLSHMKPGEEGPDGER
APGDSATSDTSLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPAL
PKDLLLPESCTGPPPGQMEGSGAPGRGASEGLPRMCTRSLTALSEPRTPGPPGLTTTPAP
PDKLAGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTPGKD
QRSMILRSRTKTQEIFHSKRRRPSEGRLPNCRATKKLLDNSHLPATFKVSGSPQKEGRVS
QRARVPKPGAGSKLSDRPLHALKRKSAFMAPVPTKKRNLVLRSRSSSNASGNGGDGKEER
PEGSPTLFKRMSSPKKAKPTKGNGEPATKPPPPEAPDACLKLASRAAFQGAMKTKVLPPR
KGRGLKLEAIVQKITSPSLKKFACKVPGPAPGNPLSPSFPEKDRGLRGAGGSPVGAEEGL
INVGTGQKLPAASVADPLCRNLTNRSLKGKLMNSKKLSSTDCFKTEAFTSPEALQPGGTA
LAPKKRSRKGRAGALGLSKGPLEKRPYLGPALLLTPRDRAGGTQGAGEDNCGGGGKKPKM
EELGLASQSPESRPCQPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRR
QQQVLPLDPAEPEIRLKYISSCKRLRSDSRIPAFSPFVRVEKRDAFTTICTVVNSPGDAP
KPHRKPSSSASSSSSSSLFSLDAAGASLATLPGGSILQPRPSLPLSSTMHLGPVVSKALS
TSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPESTCEETSLPLERTLK
GPECAAAATAGKPPRPDGPADLAKQGPLRTSARGLSRRLQSCYCCDGREDGGEEAAPADK
GRRHECSKEAPAEPGGEAQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAMDMICSSCQ
EAGATIGCCHKGCIHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggaaacatcacgcctggagaattacaggcagccgagtcaggccgggctaagctgc
gaccggcagcggctgctcgccaaggactattataacccgcagccttacccgagctacgag
ggtggcgctggcacgccctctggcacagcagcctcggtggctgctgacaagtaccaccga
ggcagcaaggccctgcccacacagcaggccctgcaggggaggccggctttccccagctac
agcgcccaggacagcagcccttacccaggccgctatgctggtgaggagagcctgcaggct
tggggggccccgcagccaccacccccacagccgcagcccctgccatcaggagtgggcaag
tatgatgagaacttaatgaaaaagacagcagtggcccccagcaggcagtatgcagagccg
ggcgcccaggtgccctttcggactcactccctgcacgtccagcagccaccactgccccag
cagcccctggcataccccaagctgcaaaggcagaagctgcagaatgacattgcctcccct
ctgcctttcccccagggcacccactttccccagcattcccagtccttccccacctcctcc
acctattcctcctccgtccagggcggtgggcagggggcccattcgtataagagctgcacg
gcgccaactgcccagccccacgataggccgctgactgccagctccagcctggccccaggg
cagcgggtccagaatcttcacgcctaccagtcgggccgcctcagctacgaccaccagcag
cagcagcagcagcagcagcagcagcagcagcagcaagctcttcagagccggcaccatgcc
caggaaaccctccattaccaaaacctcgccaagtatcagcactacgggcagcaaggccag
ggctactgccagccggatgcagcggtccggaccccggagcagtactaccagaccttcagc
cccagctccagccactcgcctgcccgctccgtgggccgttcaccctcctacagctccact
ccatctccactgatgccaaacctggagaacttcccctacagccagcagccgctgagcaca
ggggcctttccctcggggatcacagaccacagccacttcatgcccctgctcaacccctcc
ccgacagatgccaccagctctgtggacacccaggccggcaatggcaagccgctgcagaag
gacaagctccccgagaacctgctgtcggatctcagcctgcagagcctcacagcgctgacc
tcacaggtggagaacatttctagcactgtccagcagctgctgctctccaaggctgccgtg
ccacaaaagaaaggcgtcaagaacctcgtgtccaggaccccggagcagcacaaaagccag
cactgcagccccgaaggcagtggctactcggccgagcccgcgggcacaccgctgtcggag
ccgctgagcagtacgccacagtccacgcacgctgagccgcaggaggccgactacctgagc
ggctccgaggacccgctggagcgcagcttcctctactgcagccaggcccgtggcagccct
gccagggttaacaactcgaaggccaagcctgagtccgtgtccacttgttctgtgacctct
cctgacgacatgtccaccaaatctgacgattccttccagagcctgcacagcagtctgccg
ctcgacagcttctccaagttcgtggcgggtgagcgggactgtccgaggctgctgctaagc
gccctggcacaggaggacctggcctccgagatcctggggctgcaggaagccatcggcgag
aaggccgaaaaagcttgggccgaagcgcccagcctggccaaggacagcagcaagccaccc
ttctcgctggagaaccacagtgcctgcctggactctgtggccaagggcgcgtggccccgg
cctggggagccagaggccctgcccgaccccttgcagctggacaagggtggcaccaccaag
gacttcagcccagggctgtttgaagacccttccatggccttcgctacccctgaccccaaa
aagacaactggtcctctctcctttggcaccaagcccacccttggggctgcggctccagac
cctaccacagcagcttttgactgttttccggacacgactgctgccagctcagcagacagt
gctaacccctttgcctggccagaggaaaacctgggggatgcttgtcccaggtggggattg
caccccggcgacctcaccaagggcctggagcagggtgggaaggcctcggacggtgtcagc
aaaggggacgcccatgaggcttcggcctgcctgggcttccaggaggaggagccccctggg
gagaaggtggtctccttgcccggggacttcaagcaggaggagccaggtggggtgaaggag
gaggcaggggggctactgcagtgccctgaggtgggcaaggctgatcggtggctggaggac
agccggcactgctgttccacggccgactttggggacctcccgctgctgccacccactagc
aggaaggaggacctggaggctgaggaggagtactcctccctgtgtgagctcctgggcagc
cccgagcagaggcctggcatgcaggacccgctgtcgcccaaggccccgctcatctgcacc
aaggaggaggtggaggaggtgttggactccaaggccagctggggctccccgtgccacctc
tcaggggagtctgtcatcctgctgggccccactgtgggcaccgagtcaaaggtccagagc
tggtttgagtcttctctgtcccacatgaagccaggtgaagaggggcctgatggggagcga
gctccaggggattctgcgacctcggacacctctctggcccagaagcccaacaagcctgct
gtgcctgaggcacccattgcgaagaaagagcctgtgccacggggcaaaagcttacggagc
cggcgggtgcaccgggggctgcctgaggccgaggactccccatgcagggcacctgcgctg
cccaaagacctcttgctccctgaatcctgcacagggcccccgccaggacagatggaaggg
tctggagccccaggccggggggcctcggaggggctccccaggatgtgtactcgttctctc
acggccctgagtgagccccgcacacccgggcccccaggcctgaccaccaccccagcaccc
ccagacaaactggcgggcaagcagcgagccgccttcaagtccggcaagcgggtgggaaag
ccctcacccaaggccgcctccagccccagcaacccggctgccctgcctgtggcctccgac
agcagtcccatgggctccaagaccaaggagacagactcacctggcacacctggcaaggac
cagcgctccatgatccttcggtcacgcaccaaaacccaggagatcttccactccaagcgg
cggagaccctctgaaggccggctccccaactgccgggccaccaagaagctcctagacaac
agccacttgcctgccacgttcaaggtctccggcagcccccagaaggagggcagggtaagc
cagcgggccagggtccccaagcctggtgcaggcagcaagctctctgaccggcccctccat
gcgctcaaaaggaagtctgccttcatggcgccggtccccaccaagaagcggaacctggtc
ttgcggagccgcagcagcagcaatgccagcggcaatgggggagatgggaaggaggagagg
cccgagggctccccgaccctcttcaagaggatgtcttctcccaagaaagccaagcccacc
aagggcaacggtgagcccgccacaaagcccccaccccccgaggcccccgatgcctgcctt
aagcttgcctctcgggcggccttccagggggccatgaagaccaaggtgctgccaccccgg
aagggccggggcctgaagctggaagccattgtgcagaagatcacctcgcccagcctcaag
aagtttgcatgcaaagtgccagggcccgctcctggtaatcctctgagcccatcctttcct
gagaaggaccgtgggctcagaggtgctgggggcagcccggtgggggcagaagaaggcctg
atcaatgtgggcactgggcagaagctcccagctgcttctgttgcagatccattatgcaga
aatctgaccaacagatccttaaaaggcaaactcatgaacagtaagaaactgtcttcgacg
gactgtttcaaaactgaggccttcacgtccccggaggccctgcagcccggggggactgcc
ctggcacctaagaagagaagccggaaaggccgggctggagcccttgggctctccaaagga
cccctggagaagcggccctatcttggcccggctctgctcctgactccccgagacagggct
ggcggcacccagggggccggcgaggacaactgtggcggaggaggcaagaagccaaagatg
gaggagctgggcctggcctcccagtcccctgagagcaggccctgccagcctcagacaagg
gcacagaaacagccaggccatgccaactacagcagctattctaagcggaagcgcctcact
cggggccgggccaagaacaccacctcttcaccctgcaaggggcgagccaagcggcggcgg
cagcagcaggtattgcccctggatcccgcagagcctgaaatccgcctcaagtacatttcc
tcatgcaagcggctaaggtcagacagccggatccccgccttctcacccttcgtgcgcgtg
gagaagcgagacgcgttcaccaccatatgcactgttgtcaactcccctggagatgcaccc
aagccccacaggaaaccttcttcctctgcctcctcttcttcatcctcatccttgttttcc
ttggatgcagctggggcctccttggccacgcttcctggaggctccatcctgcagcctcgg
ccctccctgcccctctcctccacgatgcacctggggcctgtggtttccaaggccctgagt
acctcttgccttgtttgctgcctctgccaaaacccggccaacttcaaggaccttggggac
ctctgtgggccctactatcctgaacactgcctccccaaaaagaagccaaaactcaaggag
aaggtgcggccggaaagcacctgcgaggaaacctcgctgccactcgagagaacactcaaa
ggccctgagtgcgcagctgccgccactgcggggaagccccccaggcctgatggcccagcc
gacctggccaagcagggcccactgcgcaccagtgcccggggcctgtcccggaggctgcag
agctgctactgctgtgatggccgagaggacgggggcgaggaggcagccccagccgacaag
ggccgaagacatgagtgcagcaaggaggccccggcagagcccggcggggaggcccaggag
cactgggtgcacgaggcctgcgctgtgtggaccggtggcgtctacctggtggccgggaag
ctctttgggctgcaggaggccatgaaggtggccatggacatgatatgttccagctgccaa
gaagccggggccaccattgggtgctgccacaaaggatgcatccacacctatcactacccg
tgtgccagcgatgcaggttgcatattcatcgaagagaacttttctttgaaatgtcccaaa
cataagaggctgccgttgtaa
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