Callithrix jacchus (white-tufted-ear marmoset): 100407781
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Entry
100407781 CDS
T03264
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100407781 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100407781 (CNOT3)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100407781 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100407781 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
100407781
NCBI-ProteinID:
XP_035141226
Ensembl:
ENSCJAG00000001094
LinkDB
All DBs
Position
22:45940084..45957673
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AA seq
772 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYSSGPPPTASALSATPGNNGAPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGGGGGGSSSNSNSSAGGG
AGKQNGATSYSSVVADSPAEVALSSSGGNNANSQALGPPSGPHNPPPSTSKEPSAAAPTG
AGGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTTPEIKAPEQ
TLSSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLG
VCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSD
TVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDE
FEQIPDHLFVHSLTAFSPGQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccataatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaatgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggagcggttcaaagttgtggagcgagagaccaaaacc
aaagcttacagcaaggagggcctgggcctggcccagaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctcacgaataccattgacacgctcaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcagtgcagacacgcaagaagaagggcgacaag
gatcagaagcaggaccggatcgagggcttgaagcggcacattgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgttgatgcc
atccgcaagatcaaggacgacgttgagtactacgtcgactcatcccaggaccccgacttc
gaggagaatgagtttctctatgatgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acacccacctcgaccacctccagctctcccatccctcccagcccagccaactgtaccacg
gaaaactctgaagatgacaagaagagggggcgttccacagatagtgaagtcagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtg
ccacccacctattcctctggccccccacccactgcctctgccttgagtgccacccctggc
aacaatggggcccctgccccagcagcacccccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggcacccctgccccctatgcccaggctgtggccccaccagct
cccagtgggcccagcaccacccagccccggccccccagcgtccagcctagtggaggcggt
ggaggtggcggcggaggcggagggagcagcagcaatagtaacagcagtgccggtggaggg
gctggcaagcagaatggcgccaccagttacagctcagttgtagcagacagcccagcagag
gtggctttgagcagcagtgggggcaacaatgccaacagccaggccctgggccccccttcc
ggcccccacaacccacctcccagcacctcgaaggaacccagtgcggcagccccaacaggg
gctgggggcgtggccccaggctcagggaacaactcggggggacccagtctcctggtgcca
ctgcctgtgaatcctcccagctccccaacgcccagcttcagtgatgccaaggcagctggt
gccctgctcaatgggcctccgcagttcagcaccaccccggaaatcaaggccccagagcaa
actttgagctccttgaagtccatggcagaacgggcagccatcagctctggcattgaggat
cccgtgccaacgctgcacctgactgagcgagacatcatcctcagtagcacatcagcacct
ccggcctcagcccagccacccttgcagctgtcagaggtcaacataccgctgtcgctgggt
gtctgtccactgggccctgtgcccctcaccaaggagcagctctaccagcaggccatggaa
gaggccgcctggcaccacatgcctcatccctctgattctgagcgtatccggcagtacctt
ccccggaacccctgtccgacacccccctaccaccaccagatgccacccccacactcggac
actgtggagttctaccagcgcctgtcgactgagacactcttcttcatcttctactatctg
gagggcactaaggcacagtacctggcagccaaggccctaaagaagcagtcgtggcgattc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgatgag
tttgagcagatcccagaccacctcttcgtccactcactgaccgccttctcccctggccag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga
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