Callithrix jacchus (white-tufted-ear marmoset): 100407803
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Entry
100407803 CDS
T03264
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100407803 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjc01007
]
100407803 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100407803 (FARSB)
Enzymes [BR:
cjc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
100407803 (FARSB)
Amino acid related enzymes [BR:
cjc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
100407803 (FARSB)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100407803 (FARSB)
Prokaryotic type
100407803 (FARSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
100407803
NCBI-ProteinID:
XP_002749877
Ensembl:
ENSCJAG00000012181
UniProt:
F7HYR5
LinkDB
All DBs
Position
6:complement(140811546..140890295)
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGSIKAAGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF
AVAAVLRNIKFTKGRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKQYLHIIENKPLYPVIYDSNGVVLSMPPIINGD
HSRITVNTRNVFIECTGTDFTKAKIVLDIIVTMFSEYCEKQFTVEAAEVVFPNGKSYTFP
ELAYRKEIVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH
ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEVLTFALCSQ
EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKAGYVIRASEG
PAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgtgatctgctcttccaagctctgggccgcacctacact
gacgaagaatttgatgaactatgttttgaatttggtctggaacttgatgaaattacatct
gagaaggaaataataagtaaagaacaaggtagtataaaggcagcaggagcctctgatgtt
gttctttacaaaattgatgtccccgccaatagatatgatctcctgtgtctggaaggattg
gttcgaggacttcaggtcttcaaagaaaggataaaggctccggtgtataaacgggtaatg
cctgatggaaaaatccagaaattgattatcacagaagagacagctaagatacgtcctttt
gcagtagcagcagttctccgaaatataaagtttactaaaggtcgatatgacagcttcatc
gaacttcaggagaaattacatcagaatatttgcaggaaaagagcattggttgctattggt
acccatgatttggacactttgtcaggcccatttacttacactgcaaagcgtccttcagat
atcaaattcaagcctctaaataagaccaaggagtatacagcctgtgaactgatgaacata
tacaagactgacaatcaccttaaacagtatttacatatcattgaaaacaaacccctgtat
ccagttatctatgatagtaatggtgttgtcctttcaatgcctcccatcatcaatggggat
cattccagaataacagtaaatactagaaatgttttcattgaatgcacgggaactgacttt
acgaaggcaaaaatagttcttgatattattgtcaccatgttcagtgaatattgtgagaaa
caatttacggtcgaagctgctgaggtggtttttcctaatggaaaatcctatacctttcca
gaactagcctaccgaaaggagatagtgagagctgacctcattaacaaaaaagtgggaatc
agagaaactccagaaaatcttgccaaacttctgaccaggatgtatttaaaatcagaagtc
ataggtgatgggaatcagattgagattgaaatccctccaaccagagctgacattatccat
gcatgtgatattgtagaagatgcagctattgcttatggatataacaacattcagatgact
ctcccgaaaacatacaccatagctaatcaatttcctcttaataagctcactgaacttctc
agacatgacatggcagccgctggcttcactgaagtgcttacctttgccctgtgctcccaa
gaagatattgctgataaacttggtgtggatatctctgcaacaaaggcagtccacataagt
aatcctaaaacagctgagtttcaggtggcacgcactacccttcttcctggcctcctgaag
accatagcagcaaatcggaagatgccccttcctctgaaactgtttgaaatctctgacatt
gtaataaaagattctaatacagatgtaggtgcaaaaaactacaggcatctctgtgctgtg
tattacaacaagaatcctgggtttgagatcattcatgggctgctggacagaattatgcag
ttgctcgatgtgcctcctggtgaagacaaggcgggctatgtgatcagagcatcagaaggg
cctgctttcttccctgggcgatgtgcagagatctttgccaggggtcaaagcatcgggaag
cttggtgtccttcatcctgacgttatcaccaaatttgagctgaccatgccctgctcctcc
ctggaaatcaatattgaaccgtttttgtga
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