Callithrix jacchus (white-tufted-ear marmoset): 100408204
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Entry
100408204 CDS
T03264
Symbol
HPS1
Name
(RefSeq) BLOC-3 complex member HPS1 isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100408204 (HPS1)
Membrane trafficking [BR:
cjc04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
100408204 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
100408204
NCBI-ProteinID:
XP_035124625
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All DBs
Position
12:complement(87887096..87917074)
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AA seq
712 aa
AA seq
DB search
MKCVLVTTEGAEVLFYWTDEEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT
MLEKLSDTYTCFSTENGNSLYVLHLFGEILFIAINGDHTESEGDLRRKLYVLKCLFEVHF
GLVTVDSQLIRKELRPPDLEQRVQLWTHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC
ELCIEALERHVIQAVNTSPERGGEEALHTFLLVHSKLLAFYSSHSASSLRPADLLALILL
VQDLYPSESTAEDDAQPSSRRARSSQNIPVQQAWSPHSTGLTGGSSAETETDSFSLPEEY
FTPAPSPGDQSSGSTVWLEGGTPPMDALQIAEDTLQTLVPHSPAPSSPRRIFLDTNVKES
YCPLVPHTMYCLPLWPGINLVLLTRSPSAPLALLLSQLLDGFSVLEKKLKEASEAGAALR
SQPLVGDLRQRMDKFVKNRGGQEIQSTWLEFKAKAFSKSGPRSSWELLQACGKVKRQLCA
IYQLNFLTTAPSRGGPHLPQHLQDQMQRLMQEKLTDWKDFLLVKSRRNITMVSYPHTGAP
ASPTSLSEDFPGLVHFIYVDRTTGQMVAPSLCCSEKTSSELGKGPLAAFVKTKVWSLIQL
ARRYLQKGYTTLLFQEGDFYCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGMLGGDYYRK
LLRYYSKSRPAETVKCYELLALHLSVIPMDLLVQQASQLARRLWEASHIPLL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgtcttggtgaccactgagggtgcagaggtcctcttctactggacggatgag
gagtttgaagagagtctccggctgaagtttgggcagtcagagaatgaggaagaagagctc
cctgccctggaggaccagctcagcaccctcctcgccccggtcatcatctcctccatgaca
atgctagaaaagctctcggacacctacacctgcttctccacagaaaacggcaactccctg
tatgtgcttcacctgtttggagaaatccttttcattgccatcaacggcgaccacactgag
agcgagggggacctgcggcggaagctatacgtgctcaagtgcctgttcgaagtacacttc
gggctggtgactgtggacagtcagcttatccgaaaagagctgcggcccccagacctagag
cagcgtgtccagctgtggacacacttccagagcctgctgtggacctacagccgcctgcgg
gagcaggagcagtgctttgccgtggaggccctggagcggctgattcacccccagctctgt
gagctgtgcatagaggcactggagcggcacgtcattcaggctgtcaacaccagccccgag
cggggcggcgaggaggccctgcacaccttcctgctcgtgcactccaagctgctggcattc
tactctagccacagcgccagctccctgcgcccggccgacctgctcgccctcatcctcctg
gttcaggacctctaccccagtgagagcacagcagaggacgatgctcagccttcctcacga
agggcccggagcagccagaacatccccgtgcagcaggcctggagccctcactccacaggc
ctaaccggggggagctctgcagagacggagacagacagcttctccctccctgaggagtac
ttcacaccagctccttcccctggagatcagagctcaggtagcactgtctggctggagggg
ggtaccccacccatggatgcccttcagatagcggaggacactctccaaacgctggttccc
cactctcctgcgccttccagccccagaaggatctttctggacaccaacgtgaaggaaagc
tactgccccctagtgccccacaccatgtactgcctgcccctgtggccaggcatcaaccta
gtgctcctgaccaggagccccagtgcacccctggccctgctcctgtcccagctgctggat
ggcttctctgtgctggagaagaagctgaaggaagcgtcagaggccggggctgccctgcgc
tcccagcctcttgtgggagacctgcgccagaggatggacaagtttgtcaagaatcgagga
ggacaggagattcagagcacctggctggagtttaaggccaaggctttctccaaaagtggg
cccagatcctcctgggagctgctccaggcatgtgggaaggtgaagcggcagctgtgtgcc
atctaccagctaaacttcctgaccacagcccccagcaggggaggcccacatctgccccag
cacctacaggaccaaatgcagaggctcatgcaggagaagctgacagactggaaggacttc
ttgctggtgaagagcaggaggaatatcaccatggtgtcatatcctcacactggggcccca
gccagccccacaagcctctcagaagacttcccaggcttggtacacttcatctatgtggac
cgcaccaccgggcagatggtggcaccttccctctgctgcagtgaaaagacctcatcggag
ttgggcaaggggccgctggctgcttttgtcaaaaccaaggtctggtctctgatccagctg
gcgcgcagatacctacagaagggctacaccacgctgctgttccaggagggggatttctac
tgctcctacttcctgtggttcgagaatgacatggggtacaaactccagatgatcgaggtg
cccgtcctctccgacgactcagtgcctattggcatgctgggaggagactactacaggaag
ctcctgcgctactacagcaagagccgcccggctgagactgtgaagtgctatgagctgctg
gccctgcacctgtcggtcatccccatggacctgctggtgcagcaggccagccagctggcc
cggcgcctctgggaggcctcccatatccccctgctatag
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