Callithrix jacchus (white-tufted-ear marmoset): 100408239
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Entry
100408239 CDS
T03264
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100408239 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100408239 (HERC3)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100408239 (HERC3)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
HECT type E3
100408239 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
100408239
NCBI-ProteinID:
XP_002745644
Ensembl:
ENSCJAG00000006525
UniProt:
F7GTC6
LinkDB
All DBs
Position
3:complement(105093742..105204700)
Genome browser
AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFK
YHIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAMWRQKLSEHNNA
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMSSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNP
SKVLDNWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPSIIQDTVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQE
LLDYPGEDVEETFCLNFTICRESYGVIEQKKLIPGGDKVTVCKDNRQEFVDAYVNYVFQL
SVHEWYAAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEETAIYKGDYSATHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYLPVAHTCYN
LLDLPKYSSKEILSARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctctgggccaacctggtatcagcaccaacctgcaggga
attgtggctgagccccaggtgtgtgggttcatatctgacagaagtgtcaaggaagtggcc
tgtggtggaaaccactctgtgtttctgctggaagatggggaagtttacacatgtggtttg
aacaccaaggggcagctgggccatgagagggaaggaaacaagccagaacaaattggcgct
ctggccgatcagcacatcattcatgtggcatgtggagagtcccacagtctggccctcagt
gaccggggtcagctgttttcttggggtgcagggagtgatggtcaactaggactcatgact
actgaggattctgtggcagtgcccaggttaatacaaaagctgaaccagcagacaatatta
caagtttcctgtggcaactggcattgcttggctcttgcagctgatggccagttcttcacc
tggggaaagaacagccacgggcagcttggcttagggaaggagttcccctcccaagctagc
ccgcagagggtgaggtccctggaggggatcccgctggctcaggtggctgccggaggggct
cacagctttgcactatctctctcaggagctgtttttggctgggggatgaataatgcagga
cagctagggctcagtgatgaaaaagatcgagagtctccatgccatgtaaaactcttacgc
acacaaaaagttgtctatattagttgtggagaagaacacacagcagttctaacaaagagt
ggaggtgtgtttacttttggtgctggttcctgtggacaacttggacatgactccatgaat
gatgaggttaatcctagaagagttctagagctgatgggtagtgaagtaactcagattgct
tgtggcagacaacataccctagccttcgtgccttcttctggactcatctatgcatttggt
tgtggagcaagaggtcaattaggaactgggcacacttgtaatgttaagtgcccatctcct
gtcaagggttactgggccgcccacagtggccagcttacagcccgagctgatcgctttaaa
tatcatatcgttaagcagatcttctctggaggagaccaaacttttgtactttgctccaaa
tacgagaattcttctcctgctgttgacttcaggactatgaaccaagcacattataccagt
ttaataaatgatgaaaccatagcaatgtggagacaaaaactctcagaacacaacaatgca
aatacaatcaatggtgttgttcagatattatcttctgcagcctgttggaatggaagtttt
cttgaaaaaaaaattgatgaacattttaaaacaagtcccaaaatccctgggattgacctg
aactcaactagggtgttgtttgagaagttaatgagctctcagcactccatgattctagaa
cagattttaaacagctttgaaagttgcctgattccccaattgtcaagttcaccaccagat
gttgaagccatgagaatctatttaatattacctgagtttcccctactccaggattccaag
tattatataacattgactattcccttggctatggccattctgcggctggatacaaacccc
agcaaagtactagataactggtggtctcaggtatgcccgaaatatttcatgaagctggta
aacctctataaaggtgcagtcctttatctactgaggggaagaaagacattcttaattccc
gtactgtttaacaattatattacagcagctctcaaactcttggagaagttatataaggta
aatcttaaagtgaagcatgtggaatatgatacattttacattcctgagatttccaatctc
gtggacattcaggaagactacctcatgtggttcttgcatcaagcaggaatgaaggcgaga
ccatcaataatacaggatactgtaacactttgttcttaccctttcatctttgatgctcaa
gccaagaccaaaatgttacagacagatgctgaactacagatgcaggtggctgtcaatgga
gccaacctgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagcccc
ttcctggtccttcacgttcgcaggaacaaccttgttggagatgccctaagagagctgagc
attcattctgatattgatttgaaaaagcctctcaaagtaatctttgatggtgaagaagca
gtggatgctggcggtgttacaaaggaattttttcttttgctgttaaaagaacttttgaat
cccatctatggaatgtttacctactatcaagattcaaatctcttgtggttttcagatacg
tgttttgtagagcacaactggtttcacttgattggcataacctgtggattagctatctac
aattccactgtggttgatctccactttccattggctctctacaagaagttacttaacgtg
aagcctggcttggaagacttaaaggagttgtcacccactgaaggaaggagtctccaagag
ctcttagattaccccggggaggatgttgaggagactttctgcctcaacttcacgatctgc
cgagaaagctatggagtgattgaacagaagaagctaatacctgggggagataaagtgact
gtgtgcaaggataacaggcaggaatttgtggatgcttatgtgaattatgtcttccaactc
tcagttcatgaatggtacgcagccttctctagtggcttcctaaaggtgtgtggtggcaaa
gtacttgagctcttccagccttcagaactgagggctatgatggtggggaacagcaactac
aactgggaagaactggaagagactgctatctacaagggagattactcggccacacatccc
actgtaaaactattttgggaaacatttcatgagtttccattggaaaagaagaagaagttt
ctcttgtttctgacaggcagcgatcggattcccatctacggcatggccagcctacagatt
gtcatccagtctacagccagcggggaggagtacttgccggtggcccacacttgttacaac
cttcttgacctccccaagtacagcagcaaagagattctgagtgcacggctgacccaggct
cttgacaactatgaagggtttagtttggcctga
DBGET
integrated database retrieval system
