Callithrix jacchus (white-tufted-ear marmoset): 100408354
Help
Entry
100408354 CDS
T03264
Symbol
SLC22A5
Name
(RefSeq) organic cation/carnitine transporter 2 isoform X4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
100408354 (SLC22A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100408354 (SLC22A5)
Transporters [BR:
cjc02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
100408354 (SLC22A5)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
100408354 (SLC22A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
DUF6069
Motif
Other DBs
NCBI-GeneID:
100408354
NCBI-ProteinID:
XP_017825182
Ensembl:
ENSCJAG00000012972
UniProt:
F7HCZ2
LinkDB
All DBs
Position
2:complement(72877566..72902002)
Genome browser
AA seq
581 aa
AA seq
DB search
MRDYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSSVFLIGTPAHRCRVPDAANLSS
AWRNHSVPLRLQDGREVPHSCRRYRLATIANFSALGLEPGRDVDLGQLELESCLDGWEFS
QDVYLSTIVTEQDSGAHNAMKNRMGRKLHFCLPAQWNLVCEDDWKAPLTISLFFVGVLLG
SFISGQLSDRFGRKNVLFVTMGMQTGFSFLQLFSKNFEMFVVLFVFVGMGQISNYVAAFV
LGTEILGKSVRIIFSTLGVCIFYAFGYMVLPLFAYFIRDWRMLLLALTVPGVLCVALWWF
IPESPRWLISQGRFEEAEVIIRKAAKANGIAVPSTIFDPSELQDLSSKKQQSHSILDLLR
TRNIRMVTIMSIILWMTISVGYFGLSLDTPNLHGDIYVNCFLSATVEVPAYVLAWLLLRY
LPRRYSMATALFLGGSVLLFVQLVPPDLYYLTTALVMVGKFGITAAFSMVYVYTAELYPT
VVRNMGVGVSSTASRLGSILSPYFVYLGVYDRFLPYILMGSLTILTAILTLFLPESFGTP
LPDTIDQMLRVKGMKHRQTPSHTRMLKDGEERPTILKSTAL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcgggactacgacgaggtgaccgccttcctgggcgagtgggggcccttccagcgcctc
atcttcttcctgctcagcgccagcatcatccccaatggcttcaccggcctgtcctccgtg
ttcctgatagggaccccggcgcaccgctgccgggtgccggacgccgctaacctgagcagc
gcctggcgcaaccacagtgtcccgctgcggctgcaggacggccgcgaggtgccccacagc
tgccgccgctaccggctcgccaccatcgccaacttctcggcgctcgggctggagccgggg
cgcgacgtggacctggggcagctggagctggagagctgcctggatggctgggagttcagc
caggacgtctacctgtccaccatcgtgaccgagcaagacagtggggcccacaacgctatg
aaaaacaggatggggaggaaacttcatttctgccttcctgcccagtggaacctggtgtgt
gaggacgactggaaggccccactcaccatctccttgttcttcgtgggtgtgctgttgggc
tccttcatttcggggcagctgtcagacaggtttggccggaagaatgtgctgtttgtgacc
atgggcatgcagacaggcttcagcttcctgcagctcttctcgaagaactttgagatgttt
gtcgtgctgtttgtctttgtaggcatgggccagatctccaactacgtggcagcatttgtc
ctggggacagaaattcttggcaagtcagttcgtataatattctctacgttaggagtgtgc
atattttatgcatttggctacatggtgctgccactgtttgcttacttcatccgagactgg
cggatgctgctgctggcgctgacggtgccaggggtgctgtgtgtggcactctggtggttc
attcctgagtccccccgatggctcatctctcagggacgatttgaagaggcagaggtgatc
atccgcaaggctgccaaagccaatgggattgctgtcccctccaccatctttgacccgagt
gagttacaagacctaagttccaagaagcagcagtcccacagcattctggatctgcttcga
acccggaatatccggatggtcaccatcatgtccataattctgtggatgaccatatcagtg
ggctatttcgggctttcccttgatactcctaacttgcatggggacatctatgtgaactgc
ttcctttcagcaacggttgaagtcccagcatacgtgttggcctggctgctgctgcggtat
ttgccccggcgctattccatggccactgccctcttcctgggtggcagtgtccttctcttc
gtgcagctggtgcccccagacttgtattatttgactacagccctggtgatggtaggcaag
tttggaatcacagctgccttttccatggtctacgtgtacacagctgagctgtatcccaca
gtggtgagaaacatgggtgtgggagttagctccacagcatcccgcctgggcagcatcctg
tctccctactttgtttacctaggtgtctacgaccgcttcctgccctacattctcatggga
agtctgaccatcctgacagccatcctcactttgtttctcccagagagcttcggtacccca
ctcccagacaccattgaccagatgctaagggtcaaaggaatgaaacacagacaaactcca
agtcacacaaggatgttaaaagatggtgaagaaaggcccacaattcttaaaagcacagcc
ctctaa
DBGET
integrated database retrieval system
