Callithrix jacchus (white-tufted-ear marmoset): 100408367
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Entry
100408367 CDS
T03264
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X23
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100408367 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
100408367 (LIMCH1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
100408367
NCBI-ProteinID:
XP_003732559
Ensembl:
ENSCJAG00000019269
UniProt:
U3DS21
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All DBs
Position
3:complement(148267955..148616107)
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AA seq
1056 aa
AA seq
DB search
MACPTLGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSVVPFNQYLPNKSNQTAYVPAPLRKKKVEREEYRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVQPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSSFL
NDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTVTPKAVPMLTPKP
YSQPKNSQEVLKTFKVDGKVSMNGETVHREEEKERECPTGAPAHSLTKSQMFEGVARVHG
SPLELKQDNSSIEINIKKPNSVPQELTATTEKMEPNSQEDENDGGKLRKGNIELATSEPQ
HFTTTVTRCSPTVAFVEFPSSPQLKNDVPEEKDQNKQENEMSGKVELVLSQKVVKPKSPE
PEATLTYPFLDKMPEANQLHLPNLSSQVDSPSSEKSPVTTPFKFWAWDPEEERRRQEKWQ
QEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSADQ
LSASSSMTEGSGAMNKIDLENCQDEKQDRRWKKSFQGDDNDLLLKTRESDRLEEKGSLTQ
GALVHSGNPVSKGVLEDHQLDTETGSPHCGTSPQLSQDPSQNQQVSNPVHSAEDMKPKTL
PLDKSINHQIESPSERRKSISGKKLCSSCGLPLGKGAAMIIETLNLYFHIQCFRCGICKG
QLGDAVSGTDVRIRNGLLNCNDCYMRSRSAGQPTTL
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccactctcggtctggaagctcttcagcccctgcagcccgagccgcccccc
gagcccgccttctccgaggcacagaagtggatcgagcaagtaactggcagaagttttggt
gataaagattttcggacaggtttagaaaatggaatcctcctctgtgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggactggac
aatattatcttattcttgagaggttgtaaagagctcggcctaaaagaatctcaacttttt
gacccgagtgacctccaggatacatccaacagagtaacagtcaagagccttgattatagt
aggaagctgaaaaatgtattagttaccatttactggctgggaaaagcagcaaacagctgc
acatcctacagcggaacgacactaaacctgaaggagtttgaaggattgttggctcagatg
cgaaaggagactgatgacattgagagtcctaaacgcagtatccgagacagtggctacatc
gactgctgggattctgagcgcagcgactcgctctctcctcctcgccacggcagagatgat
tccttcgacagcctagattcctttggctctcgttctcggcagacgccttcaccagatgta
gtcctcaggggaagcagtgatgggagaggaagtgactctgaatccgacttgcctcatcgg
aagctgccagatgtgaagaaggatgacatgtcagcaaggcggacttcccatggtgagccg
aagtcagtagtgccttttaaccagtacctcccgaacaaaagcaatcagacggcctatgtc
cctgcacctctgagaaagaagaaagtagagcgtgaggaataccgcaagagctggagtacc
gccacctcccccctgggtggggagaggcccttcagatacggtccgagaactcctgtgtct
gatgacgcagagagcacgagcatgtttgacatgcggtgtgaggaggaggccgcggtgcag
ccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagggaagag
gacgacaaatggcaagatgacctggctcgttggaagagtcgtagaagaagtgtttctcag
gacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttactggctggagaagat
ggaacaagtgaacgaaggaaaagtattaaaacctacagagaaattgttcaggaaaaagag
cggagagagagagagttgcatgaagcgtataagaacgctcggtcccaggaagaggcagag
gggatccttcaacagtacatcgagaggttcaccatcagtgaggctgttcttgaacgtttg
gagatgccaaaaattctggaaagaagccattcaacagagccaaatttatcttctttcctg
aacgaccccaaccccatgaaatacctgcggcaacagtcactgcctccacccaaattcact
gccactgttgaaaccaccattgctcgtgccagtgttctggataccagcatgtcagcaggc
agtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctgacacctaagcct
tattcccagcccaaaaattctcaagaggttctgaagacctttaaggtagatgggaaagtc
agcatgaacggagagacagttcatagagaggaggagaaggaaagagagtgtcctacgggg
gcacctgcccactccttaaccaaatcccagatgtttgaaggtgtggccagagtgcatggg
tctccactggagctgaaacaagacaacagcagcattgagatcaatataaagaagccaaac
tctgttccccaagagctcacagcaaccactgagaaaatggaaccgaatagtcaagaggat
gagaatgatggtggaaaactaagaaaagggaatatagaacttgccacatcagaaccacag
cattttacaacaactgtgactcgatgcagccctactgtggcctttgtggaatttccctcc
agcccccagctgaagaatgatgtgccagaagaaaaagaccagaataaacaagaaaatgaa
atgagtggaaaggtggagttggtactgtcgcaaaaggtggtaaagccaaaatctccagag
ccagaagcaacgctgacatatccatttctggacaaaatgcctgaagccaaccaactacat
ttgccaaatctcagttctcaagtggattctccaagcagtgaaaagtcacctgttacgaca
ccttttaagttctgggcatgggacccagaagaggagcgcaggcgacaggaaaagtggcaa
caggaacaggaacgtttgctccaggaaagataccagaaggagcaggacaagctgaaagaa
gagtgggaaaaggcccaaaaggaggtggaagaggaagaacgcagatactatgaggaggag
cgtaagataattgaagacactgtggttccatttactatttcttcaagttccgctgaccaa
ctgtctgcctcctcctccatgactgaaggcagtggggcaatgaataagatagacctggaa
aactgtcaagatgaaaaacaagacagaagatggaagaaatcattccagggagacgacaat
gacttattgctgaagactagggaaagtgatcgactggaggagaagggcagcctaactcaa
ggggccttggttcattctgggaaccctgtatcgaaaggagtccttgaagaccatcagctg
gatactgagactgggtccccacactgtgggacgagcccacagctctctcaggatccatcc
cagaatcagcaggtatcaaatccagtgcacagtgcagaagacatgaagccaaaaaccctc
ccactggataaaagcattaaccatcagattgagtctcccagtgaaagacggaagtctata
agtggaaagaagctgtgctcctcctgtgggcttcctttgggtaaaggagctgcgatgatc
atcgagaccctcaatctctattttcacatccagtgtttcaggtgtggaatttgtaaaggc
cagcttggagatgcagtgagtgggacagatgttaggattcgaaatggtcttctgaactgt
aatgattgctacatgcgatccagaagtgccgggcagcctacaacattgtga
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integrated database retrieval system
