Callithrix jacchus (white-tufted-ear marmoset): 100408455
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Entry
100408455 CDS
T03264
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100408455 (SORCS3)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Others
Others
100408455 (SORCS3)
Endosome - Lysosome transport
100408455 (SORCS3)
Endosome - Golgi transport
100408455 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100408455
NCBI-ProteinID:
XP_002756628
Ensembl:
ENSCJAG00000018513
UniProt:
F6YYH9
LinkDB
All DBs
Position
12:94331535..94940906
Genome browser
AA seq
1222 aa
AA seq
DB search
MEAARTERLAGWPGTPLVRTGLLLLSTWVLAGAEITWDATGGPGRPAAPASRPPALSPLS
RRAVASQWPEELATARRAAVLGRRAGSELLPQQGGGSGGEMQVEAGGTSRADEWRGPGIP
APGKLGGARRSRRAQPPSAPERGDTRATAPADGSRGSRPLAKGSREEVKSPRAGGLAAEE
LRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTY
EKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLTFYIQSL
LFHPKQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVAGLDKEADLVHMEVR
TTDGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSYRRE
TFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKS
SRGLMGNIIIELYEVAGIKGIFLANKKVDDRVKTYITYNKGRDWRLLQAPDVDLRGGPVH
CLLPFCSLHLHLQLSENPYSSGRISSKETAPGLVVATGNIGPELSYTDIGVFISSDGGNT
WRQIFDEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWDKYGFTSVPLFVDGALV
EAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRRCTKEDYQTWHLLNQGEPCVMGERKI
FKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCVPAFWYNPASPSKD
CSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRLVAEQGHN
ATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIKHVYKSAGIFQVTAYAENNLG
SDTAVLFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWFGNSTKPLIT
LDSSISFTFLAEGTNTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPE
WRQDIGNVIKRALVKVTSVPEDQILIAVFPGLPTSAELFILPPKNLTERRKGNEGDLEQI
VETLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVVFVGLAV
FLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELDTRV
IGGIATIANSESTKEIPNCTSV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgtacggagcgcctagcaggctggccggggacgccgcttgtcaggacg
gggctcctactcctgtcgacgtgggttctggccggcgctgagatcacttgggacgcgaca
ggcggtccagggcgcccggcggccccggcttcgcggccaccggcgttgtctccactctcg
cggcgggcagtggccagccagtggccggaggagctggcgactgcgcggagagccgctgtg
ctggggcgccgggccggatcagagctgctgccccagcagggcggcggcagcggcggtgag
atgcaggtggaagccggagggacgtcgcgggcagacgagtggcggggaccgggcatccca
gctcctggcaagcttggcggcgcgaggaggagtcgccgggctcagccccccagcgccccg
gaacgcggggacacccgggctactgctccggccgatggttccagaggaagccgtcctctg
gccaagggttcccgggaggaggtgaagtcgccgcgggctgggggcttggcggctgaagag
ctccggctgcccagcacctccttcgcgttgaccggggactcggcccacaaccaagccatg
gtgcactggtcgggacacaacagcagcgtcatacttatcctgacaaagctgtatgacttc
aacctgggcagcgtgactgagagttcactttggaggtcgacagattatggtaccacctat
gaaaagctgaatgacaaagtgggtttgaagactgtcctcagttacctctatgtcaatccc
accaacaaaaggaagattatgcttctcagtgatcctgaaatggagagcagcatactgatc
agctcagatgaaggggcgacctatcagaagtatcgactcaccttctatatccagagcctg
ctctttcatcccaagcaagaggactgggtgctggcctacagtttggatcaaaagctgtac
agctctatggactttggaagacggtggcaactcatgcatgaacgcatcacacccaacagg
ttttactggtcagtggctggattggataaggaggcggacctggtacacatggaggtgcgg
accacggacggatatgctcactacctcacctgcagaatccaggaatgtgctgagacaact
agaagtggcccctttgcccgctccattgacatcagttccctggttgtccaggatgaatat
atcttcattcaggtaacaactggtggaagagccagctactacgtgtcttatcgaagagag
acctttgctcagataaagctgcctaagtactcattgccaaaggacatgcacatcatcagt
acagatgagaaccaagtatttgcagcagtccaagaatggaaccagaatgacacgtacaac
ctctacatctcagacacgcgtgggatttacttcactctggccatggagaacatcaaaagc
agcagaggtctaatgggaaacatcatcatagaattgtatgaggtagcaggtatcaaaggg
atatttctggcaaacaagaaggtggatgaccgggtgaagacatacatcacttacaacaaa
ggcagggattggcgcctgctgcaagctccagatgtggacctgagaggaggcccagtgcac
tgcctgctgcccttctgttcgttacatctgcacttgcagctctctgaaaatccatattcc
tcaggaagaatctctagcaaagagacagccccaggacttgtggtggctacaggcaacatt
ggcccggagctgtcatacactgatattggtgtgttcatctcctccgatgggggcaacaca
tggagacagatctttgatgaagagtacaatgtctggttcctagactggggtggcgccctc
gtggccatgaaacacacacctctgccagtcaggcatttgtgggtgagttttgatgaaggc
cactcttgggacaagtatggtttcacttcagttcctctctttgttgacggggctctggtg
gaggcaggaatggagacccacatcatgacagtttttggccacttcagcctccgctccgaa
tggcaattggtgaaagtggactacaaatctatcttcagccggcgttgcaccaaggaggac
tatcagacttggcacctgctcaatcagggagagccttgtgtcatgggagaaaggaaaata
ttcaagaaacgtaagccaggagctcagtgtgccctgggccgagaccactcaggatcagta
gtctcagaaccctgtgtctgcgccaactgggactttgagtgtgactatggctatgagaga
catggggagagccagtgtgtcccagctttttggtacaatccagcatccccatcaaaggac
tgcagccttggtcaaagctaccttaacagcactgggtatcggcggattgtgtccaacaac
tgcacagatgggctaagggagaagtataccgccaaggcccagatgtgccctggaaaagcg
cctcggggcctccatgtggtgacgactgatgggcgcctggtggcagagcaggggcacaat
gcaactttcatcatcctcatggaggagggtgatctccaaaggacaaacatccagcttgac
tttggagatgggattgctgtgtcctacgcaaacttcagccccattgaggacggcatcaag
catgtgtataagagtgcggggatcttccaggtgacagcctatgcagagaacaaccttggc
tcagacacagctgtcctcttcctgcatgtagtttgtcctgtggagcatgttcatctccga
gttccatttgttgccataagaaataaggaggtcaacatcagtgctgtcgtgtggcccagt
cagctggggacccttacctatttctggtggttcggcaatagcacaaagcctctcatcact
ttggacagcagcatttccttcacattccttgcagagggaaccaacaccatcacagtccag
gtggctgctggaaatgcccttatccaggacacaaaggagatcgcagttcatgaatatttc
cagtcccagctcctgtcattctcccctaatctggattaccacaatcctgacattcctgaa
tggagacaagatattggcaatgttatcaagcgagctctggttaaagtaaccagtgtccca
gaggaccagatcctcattgccgtgttccctggcctccctacttcagcagagcttttcatt
ctaccacccaagaacctgacagagaggaggaaaggcaacgaaggggacctggagcaaatt
gtagaaacactgtttaatgctctcaaccaaaatttggtccagtttgagctgaagccagga
gtacaagtcattgtgtatgtcacacagctgacattagctccactggtggactccagtact
gggcacagcagctcagccatgcttatgctattgtcagtggtatttgttggcctggctgtg
tttttgatctacaagtttaaaaggaaaatcccttggattaacatctatgctcaagtccaa
catgacaaggagcaggagatgattggatcagtgagccaaagtgaaaatgcccccaaaatc
acactcagtgacttcacggagcctgaagagctgctggacaaagagctggacacgcgggtc
ataggaggcattgccaccattgcaaacagcgaaagcacaaaggagatccccaactgcact
agtgtttaa
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