Callithrix jacchus (white-tufted-ear marmoset): 100408469
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Entry
100408469 CDS
T03264
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100408469 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjc04812
]
100408469 (SPAST)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100408469 (SPAST)
Membrane trafficking [BR:
cjc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100408469 (SPAST)
Cytoskeleton proteins [BR:
cjc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100408469 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
Mg_chelatase
MIT
DUF815
IstB_IS21
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
100408469
NCBI-ProteinID:
XP_002757919
Ensembl:
ENSCJAG00000003248
UniProt:
U3ERW9
LinkDB
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Position
14:complement(80714459..80788527)
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AA seq
616 aa
AA seq
DB search
MNSPGGRGKKKGSGSACSPVPPRPPPPCLAPAPPAAGRACSPESPHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFLWLCQRFSRALMAAKRSSGAAPAPASASPPAPVPGGEAERVRVFH
KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKMQPVLPFSKSQTDVYNDNTNLACRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSSGLSGHHRAPSCSGLSMVSGVKQGSGPAPATHKGTPKTNRTNK
PSTPTTTARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgaggaaagaagaaaggctccggcagcgcctgcagcccggtg
cctcccaggcctccgcccccctgcctggcccccgcccctcccgccgccgggcgggcctgt
tcgcccgagtcgccgcataagcggaacctgtactacttctcctacccgctgttcgtaggt
ttcgcgctgctgcgtttggtcgccttccacctggggctcctcttcctgtggctttgccag
cgcttctcccgcgccctcatggcagccaagaggagctccggggccgcgccagcaccggcg
tcggcctcgcccccggcgccggtgccgggcggagaggccgagcgcgtccgagtcttccat
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaagacgagaaagcagga
cagaaggaacaagctgtggaatggtataagaagggtattgaagaactggaaaaaggaata
gctgtcatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggaccgattacaacttctagagaagatgcaacca
gttttgccattttccaagtcacaaacggatgtctataatgacaatactaacttggcatgc
cgcaatggacatctccagtcagaaagtggagctgttccaaaaagaaaagaccccttaaca
cacactagtaattcactgcctcgttcaaaaacagttatgaaaactggatcttcaggcctt
tcaggccaccatagagcacctagttgcagtggtttatccatggtttctggagtgaaacag
ggatctggtcctgcacctgccactcataagggtactccaaaaacaaataggacaaataaa
ccttctacccctacaactactgctcgtaagaaaaaagacttgaagaattttaggaatgtg
gacagcaaccttgctaaccttataatgaatgaaattgtggacaatggaacagctgttaaa
tttgatgatatagctggtcaagacttggcaaagcaagcattgcaagaaatcgttattctt
ccttctctgaggcctgagttgttcacagggcttagagctcctgccagaggactgttactc
tttggtccacctgggaatgggaagacaatgctggctaaagcagtagctgcagaatctaat
gcaaccttctttaatataagtgctgcaagtttaacttcaaaatatgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcaaccttctataattttcata
gatgaagttgatagccttttgtgtgaaagaagagaaggggagcacgatgctagtagacgc
ctaaaaactgaatttctaatagaatttgatggtgtacagtctgctggagatgacagagta
cttgtaatgggtgcaactaataggccacaagagcttgatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttaccaaatgaggagacaagactacttttgcttaaaaat
ctgttatgtaaacaaggaagcccattgacccaaaaagaattagcacaacttgctagaatg
actgatggatactcaggaagtgacctaacagccttggcaaaagatgcagcactgggtcct
atcagagaactgaaaccagaacaggtgaagaatatgtctgccagtgagatgagaaatatt
cgattatctgacttcactgaatccttgaaaaagataaaacgcagcgtcagccctcagact
ttagaagcgtacatacgttggaacaaggactttggagataccactgtttaa
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