Callithrix jacchus (white-tufted-ear marmoset): 100408472
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Entry
100408472 CDS
T03264
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100408472 (DDX17)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100408472 (DDX17)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100408472 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100408472
NCBI-ProteinID:
XP_008977406
Ensembl:
ENSCJAG00000011797
LinkDB
All DBs
Position
1:complement(206696068..206720693)
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AA seq
652 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGS
GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQ
QFSGLGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggaccgggaccgtgaccgtggaggatttggagca
agaggtggtggtggcctccccccgaagaaatttggtaatcctggggagcgtttgcgtaaa
aaaaagtgggatttgagcgagctccccaagtttgagaaaaatttttatgtggaacatccg
gaagtagcaaggctgactccatatgaggttgatgaactacgcagaaagaaagagattaca
gtgagagggggagatgtttgtcctaaacctgtgtttgccttccatcatgctaacttccca
caatatgtaatggatgtgttgatggatcagcactttacagaaccaactccaattcagtgc
cagggatttccattggctcttagtggccgggatatggtgggcattgctcaaactggctct
gggaagacattggcgtatctcctgcctgcaattgttcatattaaccaccagccatacttg
gaaaggggagatggcccaatctgtctagttctggctcctaccagagagcttgcccagcaa
gtacagcaggtggccgatgactatggcaaatgttctagattgaagagtacttgtatttat
ggaggtgctcctaaaggtccccagattcgagacttggaaagaggtgttgagatctgcata
gctactcctggacgtctgatagatttcctggagtcaggaaagacaaatcttcgccgatgt
acttaccttgtattggatgaagctgacagaatgcttgatatggggtttgaaccccagatc
cgtaaaattgttgaccaaatcaggcctgataggcagacattaatgtggagtgcaacctgg
ccaaaagaagtaagacagcttgcagaagatttccttcgtgattacacccagatcaacgta
ggcaatctggagttgagtgccaaccacaacatcctccagatagtggatgtctgcatggaa
agtgaaaaagaccacaaactgattcaactgatggaagaaataatggctgaaaaggaaaac
aagacaataatatttgtggagacaaagagacgctgtgatgatctgactcgaaggatgcgc
agagatggttggccagctatgtgtatccatggagacaagagtcaaccagaaagagattgg
gtacttaatgagttccgttctggaaaggcacccatccttattgctacagatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctca
gaggattatgtgcaccgtattggccgaacagcccgtagcaccaacaagggcaccgcctat
accttcttcaccccagggaacctgaaacaggccagagagctgattaaagtgttggaagag
gctaatcaggctatcaatccaaaactgatgcagctagtagaccacagaggtggcggcgga
ggcgggggtaagggtggtcgttctcgataccggaccacttcctcagccaacaatcccaat
ctgatgtatcaggatgagtgtgaccgaaggctacgaggagtcaaggatggtggccggaga
gactctgcaagctatcgggatcgtagtgaaaccgatagagctggttatgctaatggcagt
ggctatggaagtccaaattctgcctttggagcacaagcaggccaatacacctatggtcaa
ggcacctatggggcagctgcttatggcaccagtagctatacagctcaagaatatggtgct
ggcacttacggagctagtagcaccacctcaaccgggagaagttcacagagctctagccag
cagtttagtgggctaggccggtctgggcagcagccacagccactgatgtcacaacagttt
gcacagcctccaggagctaccaatatgataggttacatggggcagactgcctaccaatac
cctcctcctcccccccctcctcctccttcacgtaaatga
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