Callithrix jacchus (white-tufted-ear marmoset): 100408696
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Entry
100408696 CDS
T03264
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100408696 (RABGAP1)
Membrane trafficking [BR:
cjc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100408696 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
100408696
NCBI-ProteinID:
XP_002743337
Ensembl:
ENSCJAG00000020027
UniProt:
F6UX59
LinkDB
All DBs
Position
1:168604229..168786028
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AA seq
1069 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QKELADVLMDPPMDDQPGEKELVKRSQLDGEGDGPLSNQLSASSTINPVPLVGLQKPEMS
LPVKPGQGDSEVSSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQI
SLDVTLSVPNVSEGIVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATTAPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDKQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSPGKDVRNS
DMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVLFMTTAVDLVITEVQE
PVRFLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQKERKSNTDTLYEVVCLESE
SERERRKTTASPSVRLPQSGSQSSVIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGAL
KFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEE
EKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKVEIE
KIRQKVDDCERCREFFNKEGRVKGLSSTKEVLDEDTDEEKETLKNQLREMELELAQTKLQ
LVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIKTATGVQGKETC
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcctcagactcagtatctactctt
aatagtgaagattttgtcttggtttccaggcaaggagatgagacaccatctacaaataat
ggaagtgatgatgagaaaacaggactcaagattgtagggaatggaagtgaacagcagctg
cagaaagagctagcagatgtactgatggatcctccaatggacgaccagccaggggaaaag
gagcttgtgaaaaggtcacaactggatggtgaaggagatgggcctctttctaatcagctc
tccgcttcatccaccattaaccctgtgccattagtagggcttcaaaaaccagagatgagc
ctgccagtgaaacctggacaaggagattctgaagtttcaagtcctttcacaccagtggct
gatgaagacagcgtagttttcagtaaactaacttatttaggctgtgcctcagtaaatgcc
cctaggagtgaagtggaagccttaaggatgatgtccatcttaagaagccagtgtcagatt
tcactagatgttaccctttcagtgccgaatgtatctgaaggaattgtgagactcttagat
cctcagacaaacactgaaatagcaaactaccctatctacaaaatcctcttctgtgtcaga
gggcatgatggaactcctgaaagtgactgttttgcttttactgaaagtcattacaatgca
gagcttttcagaatacacgtcttccggtgtgaaatacaagaagctgtaagccggatactt
tacagctttgccactgccttccgccgttctgccaagcagaccccactttcagccactact
gcaccccagactcctgacagtgacatctttaccttctctgtgtctttagaaataaaagaa
gatgatggtaaaggttattttagtgcagttcccaaagacaaggacaaacaatgctttaaa
ctacgccaaggaattgataagaagattgtcatctatgtgcagcaaacaactaataaagaa
cttgccattgaaaggtgttttggtcttctccttagtccaggaaaagatgtacgaaatagt
gacatgcacttactagatttggaatctatgggcaaaagttcagatggaaagtcctatgtt
attactgggagctggaatccaaaatccccacattttcaagttgtaaatgaagaaactcct
aaagataaagtcttgtttatgaccacagctgtagatttggtaataacagaagtacaggag
cctgttcgatttctcctggagacaaaagttcgcgtttgctctcctaatgaaagattattc
tggcccttcagcaaacgtagtactactgaaaatttctttttgaaactaaaacagataaag
caaaaggagagaaagagtaatactgacacgttatatgaagttgtatgcttggaaagtgaa
tcagaaagagagaggaggaaaaccacagctagtccttccgttcgccttccacagtctgga
tcacagagttcagtgataccttctcctccagaagatgatgaagaggaagataatgatgaa
cctctcttgagtggatctggtgatgtatccaaagaatgtgcagaaaaaattctggaaaca
tggggagaactgttgtcaaaatggcatctcaacttgaatgtgagaccaaagcagctgtca
tccttagtaagaaatggtgttcctgaagctcttcgcggagaagtctggcagttgctagct
ggctgtcataacaatgaccacctggtagaaaaataccgcattctcatcacaaaggagtct
ccccaggacagtgctattacccgggatattaaccgaacattcccagcccatgactacttt
aaggacacaggaggagatggacaagattccttatataaaatatgcaaggcttattctgtg
tatgatgaagagattggctattgccagggccagtcatttcttgctgctgtgctccttctc
catatgcctgaagaacaggcattcagtgtcctggtcaagatcatgtttgactatggactc
agagaacttttcaagcaaaactttgaagatttgcattgcaaattttaccagttggagcgc
ctcatgcaggaatacattcctgacctatacaaccacttcctggatataagccttgaagca
cacatgtatgcctcccagtggtttcttactcttttcactgcaaaattccctctctacatg
gtcttccatatcatcgacctgcttttatgtgagggaataagtgttatttttaatgtcgcc
cttggattattaaagacttcgaaagatgacctgctgttgacagactttgaaggtgccttg
aagttctttagggttcagcttcctaagagataccgctcagaagaaaatgcaaaaaaacta
atggaattagcttgcaacatgaagattagtcagaagaagttgaaaaaatacgagaaggaa
tatcacaccatgagggaacagcaggcccagcaagaagaccccatcgagcgatttgagcgg
gagaataggcgtctacaagaagctaacatgagattggaacaggaaaacgatgacttagcc
catgaactggtgaccagcaagattgcactaaggaaggacctggataacgctgaggaaaag
gcagatgctctgaataaggagctgctgatgaccaaacagaagttgattgatgcagaagaa
gagaaaagacgtcttgaagaagagtctgctcagttaaaagaaatgtgccgtcgggaactt
gacaaggcagaatctgagattaaaaaaaacagctctatcatcggtgactataagcagatt
tgttctcagttgagtgaaagattggaaaagcagcagacagccaataaggtggaaattgag
aagattcggcaaaaagtggatgactgtgagcggtgtcgggaatttttcaacaaagaaggg
cgtgtaaaaggcctaagctcaaccaaggaggttttagatgaggacacagatgaagagaag
gagacgctcaagaaccaactgagagagatggagctagaattggcacagaccaaactccag
ttggtggaagctgagtgtaagatacaggacttggagcaccatttaggccttgccctcaat
gaggtgcaggcagccaagaagacgtggtttaaccgaacattgagctccataaagacggca
accggggttcaagggaaagagacttgctga
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integrated database retrieval system
