Callithrix jacchus (white-tufted-ear marmoset): 100408705
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Entry
100408705 CDS
T03264
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04136
Autophagy - other
cjc04140
Autophagy - animal
cjc05010
Alzheimer disease
cjc05014
Amyotrophic lateral sclerosis
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100408705 (WIPI2)
04136 Autophagy - other
100408705 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100408705 (WIPI2)
05014 Amyotrophic lateral sclerosis
100408705 (WIPI2)
05016 Huntington disease
100408705 (WIPI2)
05017 Spinocerebellar ataxia
100408705 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
100408705 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100408705 (WIPI2)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100408705 (WIPI2)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100408705 (WIPI2)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100408705 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
DUF7165
Beta-prop_Vps41
Beta-prop_RSE1_2nd
BCAS3_WD40
RMC1_N
VID27
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
100408705
NCBI-ProteinID:
XP_035147941
Ensembl:
ENSCJAG00000018164
LinkDB
All DBs
Position
2:complement(15364802..15406193)
Genome browser
AA seq
454 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTAVKRGSRATGPGHRAVVWSLAVGSKSGYKFFSLSS
VDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL
AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSAT
IGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFE
FRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLM
ASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLD
PQEGGECALMKQHRLDGSLETANEILDSASHDCPLVTQTYGAAAAKGTYVPSSPTRLAYA
DDLGAVGGTCLEEEASALRLDEDSEQPPMILRTD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggggaggccggcgccggccagctgctcttcgccaacttc
aaccaggacaacacagcagtgaaaaggggatcaagagcaactggtcctggccatcgcgct
gttgtctggtccctagctgttggtagtaagtccggttataaatttttctccctttcttct
gtggataagctggaacagatctatgaatgcaccgacacggaagatgtatgcattgtagag
agattgttctctagcagcttagtggccatcgtgagccttaaagcaccaaggaagctaaag
gtgtgccactttaagaagggaactgagatctgcaactacagctactctaacacgattctg
gctgtgaagctcaacaggcagaggctgatagtatgcctggaagagtccctgtacatccac
aacattcgggacatgaaggtactgcacacgatcagggagacgcctccaaaccctgcaggc
ctgtgtgcgctgtcaatcaacaatgacaactgctacttggcgtacccagggagcgcaacc
atcggagaggtgcaggtcttcgataccattaatttgagagctgcaaacatgattccggct
catgacagtcctttagcagcgttggcttttgacgctagtggaactaagcttgccacagct
tcggagaaggggaccgtgattagggtattttccattccagagggacaaaaactctttgag
tttcggagaggagtgaagaggtgcgtgagcatctgctccctggccttcagcatggacggc
atgttcctctccgcctccagcaacacggagaccgtgcacatcttcaaacttgagactgtg
aaagaaaaacccccagaggagcccaccacctggactgggtactttgggaaagtgctcatg
gcctccaccagctacctgccttcccaagtgacagaaatgttcaaccagggccgagccttc
gccacagtccgcctgccattctgtggccacaaaaacatctgctcgctagccacaattcag
aagatcccacggttgctggtgggcgcctccgatgggtatctgtacatgtacaacctggac
ccccaggagggcggcgagtgcgccctgatgaagcagcaccggctggatggcagtctggag
acagccaatgagatcttggactctgcctctcacgactgccccttagtcactcagacgtac
ggggcggctgcagcaaaaggtacttatgtgccttcatccccaacaagacttgcctatgca
gatgacctgggtgccgtgggtggcacctgcctggaggaggaggccagcgccctgcgcctg
gatgaggacagcgagcagccccccatgattcttcggactgactga
DBGET
integrated database retrieval system
